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anamox3_curated_scaffold_1435

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1435_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(191..2344)
DNA (2154bp) protein (718aa)
Methionine--tRNA ligase bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
methionyl-tRNA synthetase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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2460..3563
DNA (1104bp) protein (368aa)
id=3977909 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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3572..4471
DNA (900bp) protein (300aa)
Leucine rich repeat protein bin=GWF2_Ignavibacteria_33_9 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
small GTP-binding protein domain-containing protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_4
unknown

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4487..4879
DNA (393bp) protein (131aa)

This feature has no annotations

anamox3_curated_scaffold_1435_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(4901..5284)
DNA (384bp) protein (128aa)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(5278..6567)
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AKH6_IGNAJ
purD; phosphoribosylamine-glycine ligase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


6666..7394
DNA (729bp) protein (243aa)
recA protein (EC:3.6.3.8); K03553 recombination protein RecA bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Recombination protein RecA
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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7482..7709
DNA (228bp) protein (76aa)
Suspect SCG annotation. See neighboring gene [anamox3_curated_scaffold_1435_7].
Protein RecA bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
recA; recombination protein RecA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1435_9
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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comp(7786..9093)
DNA (1308bp) protein (436aa)
OmpA/MotB domain protein bin=GWF2_Ignavibacteria_33_9 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
OmpA/MotB domain-containing protein
Tax=GWF2_RIF_IGX_33_9_curated
anamox3_curated_scaffold_1435_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(9152..10468)
DNA (1317bp) protein (439aa)
Arsenite permease-like protein Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) PF7_IGNAJ">RepID=I0APF7_IGNAJ
Arsenite permease-like protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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10610..12940
DNA (2331bp) protein (777aa)
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein bin=GWB2_Ignavibacteria_35_12 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
PAS/PAC sensor signal transduction histidine kinase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(12959..14188)
DNA (1230bp) protein (410aa)
Response regulator receiver modulated metal dependent phosphohydrolase bin=GWB2_Ignavibacteria_35_12 species=Marinobacter adhaerens genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
response regulator containing a CheY-like receiver domain and an HD-GYP domain
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1435_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(14252..15046)
DNA (795bp) protein (265aa)
sps1; serine/threonine-protein kinase Sps1 (EC:2.7.11.1)
Serine/threonine protein kinase bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_trna_1
unknown

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comp(15367..15440)
DNA (74bp)
transferRNA Asn
anamox3_curated_scaffold_1435_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

15531..16247
DNA (717bp) protein (239aa)
DNA repair protein RecO bin=GWB2_Ignavibacteria_35_12 species=Peptostreptococcus stomatis genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
recO; DNA repair protein recO
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

16244..17530
DNA (1287bp) protein (429aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI000307B1FE
hemolysins-related protein containing CBS domains
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

17527..18669
DNA (1143bp) protein (381aa)
DNA replication and repair protein RecF bin=GWB2_Ignavibacteria_35_12 species=Salinibacter ruber genus=Salinibacter taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
DNA replication and repair protein RecF
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1435_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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18672..18962
DNA (291bp) protein (97aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1435_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

19011..19691
DNA (681bp) protein (227aa)
DNA gyrase subunit B bin=GWF2_Ignavibacteria_33_9 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
DNA gyrase subunit B
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 19 items

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