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anamox3_curated_scaffold_1586

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1586_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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2..445
DNA (444bp) protein (148aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
GcpE; hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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581..2650
DNA (2070bp) protein (690aa)
Peptidase, S9A/B/C family, catalytic domain protein bin=GWA2_Ignavibacteria-rel_35_8 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
peptidase, S9A/B/C family, catalytic domain-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1586_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(2718..3434)
DNA (717bp) protein (239aa)
FKBP-type peptidylprolyl isomerase; K03773 FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
FKBP-type peptidylprolyl isomerase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

3577..4044
DNA (468bp) protein (156aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase RibH (EC:2.5.1.78)
6,7-dimethyl-8-ribityllumazine synthase bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Thermodesulfobacterium taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

4091..6349
DNA (2259bp) protein (753aa)
Putative periplasmic ligand-binding sensor domain protein bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
periplasmic ligand-binding sensor domain-containing protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_6
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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6414..6773
DNA (360bp) protein (120aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
Aspartate 1-decarboxylase Tax=Algoriphagus machipongonensis RepID=A3HVC8_9BACT
L-aspartate-alpha-decarboxylase
anamox3_curated_scaffold_1586_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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6774..7529
DNA (756bp) protein (252aa)
UDP-N-acetylglucosamine pyrophosphorylase bin=GWB2_Ignavibacteria_35_12 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
nucleotidyl transferase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1586_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

7532..8281
DNA (750bp) protein (250aa)
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Tax=Chlorobium phaeobacteroides (strain BS1) RepID=GPMA_CHLPB
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_9
Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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8282..9529
DNA (1248bp) protein (416aa)
Glycosyl transferase group 1 Tax=Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 / I77R1B) RepID=E4S7X7_CALKI
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:ADQ41877.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor kristjanssonii (strain ATCC 700853 / DSM 12137 /; I77R1B).;"
anamox3_curated_scaffold_1586_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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9519..10973
DNA (1455bp) protein (485aa)
FAD/FMN-containing dehydrogenase bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
FAD/FMN-containing dehydrogenase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(13414..14406)
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
NAD-dependent epimerase/dehydratase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_12
unknown

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comp(14403..14498)
DNA (96bp) protein (32aa)

This feature has no annotations

anamox3_curated_scaffold_1586_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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14562..17054
DNA (2493bp) protein (831aa)
Nucleotidyl transferase bin=GWB2_Ignavibacteria_35_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
nucleotidyl transferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

17061..17522
DNA (462bp) protein (154aa)
hypothetical protein Tax=Gracilimonas tropica RepID=UPI000363DE90
PTS system fructose subfamily transporter subunit IIC
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

17607..21191
DNA (3585bp) protein (1195aa)
2-oxoglutarate dehydrogenase, E1 subunit bin=GWF2_Ignavibacteria_33_9 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
2-oxoglutarate dehydrogenase, E1 subunit
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(21267..22241)
DNA (975bp) protein (325aa)
Electron transfer flavoprotein subunit alpha bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
electron transfer flavoprotein subunit alpha
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(22254..23000)
DNA (747bp) protein (249aa)
Electron transfer flavoprotein subunit beta; K03521 electron transfer flavoprotein beta subunit bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
electron transfer flavoprotein subunit beta
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_18
unknown

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comp(23071..23490)
DNA (420bp) protein (140aa)

This feature has no annotations

anamox3_curated_scaffold_1586_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(23483..26407)
DNA (2925bp) protein (975aa)
UvrABC system protein A bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
uvrA; excinuclease ATPase subunit A
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_20
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(26427..28229)
DNA (1803bp) protein (601aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
TPR repeat-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1586_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

28349..29029
DNA (681bp) protein (227aa)
Suspect SCG annotation. See neighboring gene [anamox3_curated_scaffold_1586_22].
Glycine--tRNA ligase bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
glycyl-tRNA synthetase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_22
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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29008..29730
DNA (723bp) protein (241aa)
Glycine--tRNA ligase bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
glyS1; glycyl-tRNA synthetase
Tax=GWF2_RIF_IGX_33_9_curated
anamox3_curated_scaffold_1586_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

29735..31372
DNA (1638bp) protein (546aa)
Periplasmic protease bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
periplasmic protease
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_24
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

31437..32297
DNA (861bp) protein (287aa)
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
RNA polymerase, sigma 70 subunit, rpod subfamily
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_25
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

32480..32896
DNA (417bp) protein (139aa)
OsmC family protein bin=GWA2_Ignavibacteria-rel_35_8 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
OsmC family protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1586_26
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

32893..33822
DNA (930bp) protein (310aa)
TPR repeat-containing protein Tax=Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150) RepID=D5UAG7_BRAM5
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADG71690.1}; species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150); (Serpulina murdochii).;"
anamox3_curated_scaffold_1586_27
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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33824..35290
DNA (1467bp) protein (489aa)
Sodium:dicarboxylate symporter bin=GWF2_Ignavibacteria_35_20 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
sodium:dicarboxylate symporter
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1586_28
unknown

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comp(35296..35457)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 28 items

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