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anamox3_curated_scaffold_1145

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1145_1
Trichomonas vaginalis, Trichomonas, Trichomonadida, Eukaryota

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1..978
DNA (978bp) protein (326aa)
Erythrocyte binding protein, putative Tax=Trichomonas vaginalis RepID=A2FH35_TRIVA
Erythrocyte binding protein, putative {ECO:0000313|EMBL:EAX95803.1}; species="Eukaryota; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas.;" source="Trichomonas vaginalis.;"
anamox3_curated_scaffold_1145_2
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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1620..1892
DNA (273bp) protein (91aa)
30S ribosomal protein S20 bin=GWF2_Ignavibacteria_33_9 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rpsT; 30S ribosomal protein S20
Tax=GWF2_RIF_IGX_33_9_curated
anamox3_curated_scaffold_1145_trna_1
unknown

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1902..1975
DNA (74bp)
transferRNA Arg
anamox3_curated_scaffold_1145_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(2478..3809)
DNA (1332bp) protein (444aa)
GTPase Der bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
GTPase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1145_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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3886..4644
DNA (759bp) protein (253aa)
coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase bin=GWA2_Ignavibacteria-rel_35_8 species=Prevotella oulorum genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4641..5288
DNA (648bp) protein (216aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate-cysteine ligase bin=GWA2_Ignavibacteria-rel_35_8 species=Prevotella oulorum genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1145_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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5293..6510
DNA (1218bp) protein (406aa)
Aminopeptidase C bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
aminopeptidase C
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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6572..7252
DNA (681bp) protein (227aa)
hypothetical protein Tax=unclassified candidate division KSB1 RepID=UPI0003742106
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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7256..7609
DNA (354bp) protein (118aa)
hypothetical protein Tax=Enterovibrio norvegicus RepID=UPI0002F08765
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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7770..9026
DNA (1257bp) protein (419aa)
Uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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9084..9896
DNA (813bp) protein (271aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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10004..12307
DNA (2304bp) protein (768aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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12316..12978
DNA (663bp) protein (221aa)
ABC-type cytochrome c biogenesis transport system permease component B bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
ccmB; ABC-type cytochrome c biogenesis transport system permease component B
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(13041..13349)
DNA (309bp) protein (103aa)
Sigma 54 modulation protein/ribosomal protein S30EA bin=GWB2_Ignavibacteria_35_12 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_14
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(13391..14236)
DNA (846bp) protein (282aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_1145_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(14221..15060)
DNA (840bp) protein (280aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
acetyl-CoA carboxylase, carboxyl transferase, beta subunit
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_16
unknown

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comp(15073..15591)
DNA (519bp) protein (173aa)

This feature has no annotations

anamox3_curated_scaffold_1145_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(15595..17109)
DNA (1515bp) protein (505aa)
membrane protein Tax=Salisaeta longa RepID=UPI0003B62928
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(17106..17579)
DNA (474bp) protein (158aa)
Putative integral membrane protein Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S4T1_SALRD
integral membrane protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(17645..18859)
DNA (1215bp) protein (405aa)
Cell cycle protein bin=GWA2_Ignavibacteria-rel_35_8 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
cell cycle protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_20
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(18856..20184)
DNA (1329bp) protein (443aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase bin=GWA2_Ignavibacteria-rel_35_8 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
UDP-N-acetylmuramoylalanine--D-glutamate ligase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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20272..20856
DNA (585bp) protein (195aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_22
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

20868..21515
DNA (648bp) protein (216aa)
Putative transcriptional regulator bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
transcriptional regulator
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_1145_trna_2
unknown

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21568..21641
DNA (74bp)
transferRNA Met
anamox3_curated_scaffold_1145_23
unknown

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21837..22004
DNA (168bp) protein (56aa)

This feature has no annotations

anamox3_curated_scaffold_1145_24
RIFOXYA2_FULL_Elusimicrobia_53_38_curated, Elusimicrobia, Bacteria

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22047..23504
DNA (1458bp) protein (486aa)
Type I restriction-modification system, DNA-methyltransferase subunit M (EC:2.1.1.72)
Type I restriction-modification system methyltransferase subunit Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DQ8_METBF
Tax=RIFOXYA2_FULL_Elusimicrobia_53_38_curated
Displaying 26 items

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