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anamox3_curated_scaffold_233

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_233_1
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

2..157
DNA (156bp) protein (52aa)
Carbamoyl-phosphate synthase small chain Tax=Sulfurihydrogenibium sp. (strain YO3AOP1) RepID=B2V5M5_SULSY
carbamoyl phosphate synthase small subunit
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

150..3356
DNA (3207bp) protein (1069aa)
Carbamoyl-phosphate synthase large chain Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2G7_FERPA
carbamoyl-phosphate synthase, large subunit
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_3
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3345..4076)
DNA (732bp) protein (244aa)
two component LuxR family transcriptional regulator bin=GWF2_Bacteroidetes_41_31 species=Marinobacterium stanieri genus=Marinobacterium taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
uhpA; response regulator
Tax=GWF2_Bacteroidetes_41_31_curated
anamox3_curated_scaffold_233_4
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

4193..5530
DNA (1338bp) protein (446aa)
5'-3' DNA helicase Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IG94_FLUTR
5'-3' DNA helicase
Tax=BJP_IG2103_Bacteroidetes_41_9
anamox3_curated_scaffold_233_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(6262..11271)
DNA (5010bp) protein (1670aa)
Possible outer membrane protein bin=GWB2_Ignavibacteria_35_12 species=Cytophaga hutchinsonii genus=Cytophaga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
yiaD; outer membrane protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_6
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11428..15843
DNA (4416bp) protein (1472aa)
Glycosyl transferase family 9 Tax=Desulfovibrio sp. FW1012B RepID=G7QE65_9DELT
Glycosyl transferase family 9 {ECO:0000313|EMBL:EHJ45959.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
probable glycosyl transferase
anamox3_curated_scaffold_233_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

15924..17237
DNA (1314bp) protein (438aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_8
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17500..18099
DNA (600bp) protein (200aa)
Phenol-degradative gene activator Tax=Haloarcula japonica DSM 6131 RepID=M0L4U7_HALJP
RsbR, positive regulator of sigma-B {ECO:0000313|EMBL:KIG16364.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
regulator of polyketide synthase expression
anamox3_curated_scaffold_233_9
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18118..18309
DNA (192bp) protein (64aa)
Uncharacterized protein Tax=Haloarcula japonica DSM 6131 RepID=M0L3J5_HALJP
Tax=GWB2_Ignavibacteria_35_6b_curated
anamox3_curated_scaffold_233_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(18813..20810)
DNA (1998bp) protein (666aa)
30S ribosomal protein S1 bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S1
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

21050..22723
DNA (1674bp) protein (558aa)
heme ABC transporter ATP-binding protein Tax=Butyricimonas synergistica RepID=UPI0003735807
ChvD family ATP-binding protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(22800..22964)
DNA (165bp) protein (55aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(23000..23368)
DNA (369bp) protein (123aa)
Thioredoxin bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
thioredoxin
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

23525..25570
DNA (2046bp) protein (682aa)
endopeptidase bin=GWF2_Bacteroidetes_41_31 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
peptidase M13
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_15
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(25628..26047)
DNA (420bp) protein (140aa)
Sll5123 protein bin=GWA2_Ignavibacteria-rel_35_8 species=Synechocystis sp. PCC 6803 genus=Synechocystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(26051..26479)
DNA (429bp) protein (143aa)
UmuD protein. Serine peptidase. MEROPS family S24 bin=GWA2_Ignavibacteria-rel_35_8 species=Synechococcus sp. genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_17
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26582..27058
DNA (477bp) protein (159aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Ribonuclease H Tax=Eubacterium sp. CAG:274 RepID=R6P9Z5_9FIRM
ribonuclease HI
anamox3_curated_scaffold_233_18

Not on your lists

27055..27927
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN06692.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
putative lipoprotein
anamox3_curated_scaffold_233_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

27932..29908
DNA (1977bp) protein (659aa)
Kef-type K+ transport system, membrane component Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYN6_METHD
Kef-type K+ transport system, membrane component
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_20
unknown

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29953..30054
DNA (102bp) protein (34aa)

This feature has no annotations

anamox3_curated_scaffold_233_21
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(30342..31526)
DNA (1185bp) protein (395aa)
N-acetylmuramoyl-L-alanine amidase Tax=Saprospira grandis DSM 2844 RepID=J1I8A4_9SPHI
cell wall hydrolase/autolysin
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_22
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

31640..33490
DNA (1851bp) protein (617aa)
methionine synthase I/5,10-methylenetetrahydrofolate reductase (EC:2.1.1.10)
Methylenetetrahydrofolate reductase bin=GWA2_Ignavibacteria-rel_35_8 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(33493..34386)
DNA (894bp) protein (298aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_24
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(34383..35282)
DNA (900bp) protein (300aa)
Proline dehydrogenase bin=GWF2_Ignavibacteria_33_9 species=Deferribacter desulfuricans genus=Deferribacter taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
proline dehydrogenase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_25
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(35345..35950)
DNA (606bp) protein (202aa)
Thymidylate kinase bin=GWB2_Ignavibacteria_35_12 species=Prosthecochloris vibrioformis genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
thymidylate kinase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox3_curated_scaffold_233_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(35958..36659)
DNA (702bp) protein (234aa)
Ribosomal RNA small subunit methyltransferase I bin=GWB2_Ignavibacteria_35_12 species=Pedobacter saltans genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_233_27
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(36635..37132)
DNA (498bp) protein (166aa)
cytidine/deoxycytidylate deaminase family protein, zinc-binding protein (EC:3.5.4.-)
CMP/dCMP deaminase zinc-binding bin=GWF2_Ignavibacteria_33_9 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=GWF2_RIF_IGX_33_9_curated
anamox3_curated_scaffold_233_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(37135..38289)
DNA (1155bp) protein (385aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
class I and II aminotransferase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_233_29
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(38286..39461)
DNA (1176bp) protein (392aa)
amidohydrolase (EC:3.5.1.47)
Amidohydrolase bin=GWA2_Ignavibacteria-rel_35_8 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox3_curated_scaffold_233_30
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(39462..40274)
DNA (813bp) protein (271aa)
Diaminopimelate epimerase bin=GWF2_Ignavibacteria_33_9 species=Thermotoga thermarum genus=Thermotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
dapF; diaminopimelate epimerase
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying items 1-30 of 52 in total

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