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anamox3_curated_scaffold_3000

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_3000_1
unknown

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comp(1..147)
DNA (147bp) protein (49aa)

This feature has no annotations

anamox3_curated_scaffold_3000_2
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(262..1023)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000369B232
Uncharacterized protein {ECO:0000313|EMBL:EOZ93674.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
anamox3_curated_scaffold_3000_3
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1039..1614)
DNA (576bp) protein (192aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Indibacter alkaliphilus LW1 RepID=S2DV09_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EOZ93673.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
sigma-70 family RNA polymerase sigma factor
anamox3_curated_scaffold_3000_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2000..2611)
DNA (612bp) protein (204aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003732C2E
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:KIC93212.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
fumarylacetoacetate (FAA) hydrolase
anamox3_curated_scaffold_3000_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(2802..3389)
DNA (588bp) protein (196aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037BFCB3
peptidyl-tRNA hydrolase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox3_curated_scaffold_3000_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(3455..4087)
DNA (633bp) protein (211aa)
50S ribosomal protein L25 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL1_NIAKG
50S ribosomal protein L25P
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_3000_7
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4110..5060)
DNA (951bp) protein (317aa)
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KIC93215.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KIC93215.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Ribose-phosphate pyrophosphokinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLL0_NIAKG
ribose-phosphate pyrophosphokinase
anamox3_curated_scaffold_3000_8
unknown

Not on your lists

comp(5262..5471)
DNA (210bp) protein (70aa)

This feature has no annotations

anamox3_curated_scaffold_3000_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5547..6242
DNA (696bp) protein (232aa)
DNA repair protein RadC Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLK8_NIAKG
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:AEV96577.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_3000_10
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6495..7250)
DNA (756bp) protein (252aa)
Uncharacterized protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PMI4_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM72317.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
anamox3_curated_scaffold_3000_11
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7260..7628)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PMI5_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM72318.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
anamox3_curated_scaffold_3000_12
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8143..9531)
DNA (1389bp) protein (463aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
NAD(P) transhydrogenase subunit beta Tax=Algoriphagus machipongonensis RepID=A3HWI7_9BACT
pntB; NAD(P) transhydrogenase subunit beta
anamox3_curated_scaffold_3000_13
Algoriphagus machipongonensis, Algoriphagus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9551..9841)
DNA (291bp) protein (97aa)
Putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) Tax=Algoriphagus machipongonensis RepID=A3HWI8_9BACT
Putative nicotinamide nucleotide transhydrogenase, subunit alpha 2 (A2) {ECO:0000313|EMBL:EAZ80961.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Algoriphagus.;" source="Algoriphagus machipongonensis.;"
NAD(P) transhydrogenase subunit alpha part 2
anamox3_curated_scaffold_3000_14
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9860..10480)
DNA (621bp) protein (207aa)
NAD(P) transhydrogenase subunit alpha part 1 {ECO:0000313|EMBL:EMR03253.1}; EC=1.6.1.2 {ECO:0000313|EMBL:EMR03253.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
NAD(P) transhydrogenase subunit alpha part 1 Tax=Cesiribacter andamanensis AMV16 RepID=M7N3K8_9BACT
NAD(P)(+) transhydrogenase
Displaying 14 items

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