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anamox3_curated_scaffold_2770

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2770_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..943
DNA (942bp) protein (314aa)
Malic enzyme {ECO:0000313|EMBL:KIC89262.1}; EC=1.1.1.40 {ECO:0000313|EMBL:KIC89262.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Allosteric NADP-dependent malic enzyme Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TKA8_NIAKG
allosteric NADP-dependent malic enzyme
anamox3_curated_scaffold_2770_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1031..2542)
DNA (1512bp) protein (504aa)
TonB-denpendent receptor Tax=Spirosoma panaciterrae RepID=UPI000363915F
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT93732.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox3_curated_scaffold_2770_3
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(3449..4438)
DNA (990bp) protein (330aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:ADY51819.1}; EC=1.4.1.16 {ECO:0000313|EMBL:ADY51819.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
Diaminopimelate dehydrogenase Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SDS3_PEDSD
anamox3_curated_scaffold_2770_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4585..5580)
DNA (996bp) protein (332aa)
Mg2 transporter protein CorA family protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PKR6_CHIPD
Mg2 transporter protein CorA family protein
Mg2 transporter protein CorA family protein {ECO:0000313|EMBL:ACU62132.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox3_curated_scaffold_2770_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5600..6385)
DNA (786bp) protein (262aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Diaminopimelate epimerase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFY7_NIAKG
diaminopimelate epimerase
anamox3_curated_scaffold_2770_trna_1
unknown

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7413..7483
DNA (71bp)
transferRNA Cys
anamox3_curated_scaffold_2770_6
unknown

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comp(7565..7810)
DNA (246bp) protein (82aa)

This feature has no annotations

anamox3_curated_scaffold_2770_7
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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7881..10955
DNA (3075bp) protein (1025aa)
Uncharacterized protein Tax=Cesiribacter andamanensis AMV16 RepID=M7NAX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EMR04321.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
HYR domain-containing protein
anamox3_curated_scaffold_2770_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(10981..12381)
DNA (1401bp) protein (467aa)
Arginine decarboxylase {ECO:0000256|SAAS:SAAS00212226}; EC=4.1.1.19 {ECO:0000256|SAAS:SAAS00212226};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Orn/DAP/Arg decarboxylase 2 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU0_NIAKG
Orn/DAP/Arg decarboxylase 2
anamox3_curated_scaffold_2770_9
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(12534..12878)
DNA (345bp) protein (115aa)
50S ribosomal protein L20 Tax=Niabella aurantiaca RepID=UPI000373C8AD
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
50S ribosomal protein L20P
anamox3_curated_scaffold_2770_10
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(12975..13172)
DNA (198bp) protein (66aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003768C0F
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox3_curated_scaffold_2770_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13501..13710
DNA (210bp) protein (70aa)
Peptidase S45 penicillin amidase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PN41_CHIPD
Acyl-homoserine-lactone acylase {ECO:0000313|EMBL:KIC95031.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase S45 penicillin amidase
Displaying 12 items

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