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anamox3_curated_scaffold_2889

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2889_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2..337
DNA (336bp) protein (112aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Histidine kinase Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIE3_CHIPD
histidine kinase
anamox3_curated_scaffold_2889_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(351..2024)
DNA (1674bp) protein (558aa)
PHP domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T913_NIAKG
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:AEV96966.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2889_3
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(2161..2352)
DNA (192bp) protein (64aa)
Putative histone H1-like protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCF7_CHIPD
histone H1-like protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox3_curated_scaffold_2889_4
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(2434..2700)
DNA (267bp) protein (89aa)
50S ribosomal protein L27 Tax=Niabella aurantiaca RepID=UPI000374552F
50S ribosomal protein L27
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox3_curated_scaffold_2889_5
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(2759..3136)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000362D1FD
50S ribosomal protein L21
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox3_curated_scaffold_2889_6
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3203..4702
DNA (1500bp) protein (500aa)
GH3 auxin-responsive promoter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG
GH3 auxin-responsive promoter
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEV96972.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2889_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4812..5966
DNA (1155bp) protein (385aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase Tax=Segetibacter koreensis RepID=UPI000367CA70
1-deoxy-D-xylulose 5-phosphate reductoisomerase
anamox3_curated_scaffold_2889_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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6049..7425
DNA (1377bp) protein (459aa)
Zinc metalloprotease {ECO:0000256|RuleBase:RU362031}; EC=3.4.24.- {ECO:0000256|RuleBase:RU362031};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Peptidase M50 bin=GWA2_Bacteroidetes_33_15 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
peptidase family M50
anamox3_curated_scaffold_2889_9
unknown

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comp(7246..7632)
DNA (387bp) protein (129aa)

This feature has no annotations

anamox3_curated_scaffold_2889_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8305..8670
DNA (366bp) protein (122aa)
Transcriptional regulator, AraC family Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUY3_DYAFD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT93120.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox3_curated_scaffold_2889_11
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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8759..10720
DNA (1962bp) protein (654aa)
Uncharacterized protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGY2_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49166.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Displaying 11 items

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