ggKbase home page

anamox3_curated_scaffold_2227

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2227_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..520
DNA (519bp) protein (173aa)
UPF0301 protein Niako_7310 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCS0_NIAKG
UPF0301 protein yqgE
UPF0301 protein Niako_7310 {ECO:0000256|HAMAP-Rule:MF_00758}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2227_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(592..1215)
DNA (624bp) protein (208aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCR9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW03523.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2227_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1237..1887)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000366615C
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AEW03522.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2227_4
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2256..2885
DNA (630bp) protein (210aa)
Two component transcriptional regulator, LuxR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIY2_NIAKG
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC94833.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
two component transcriptional regulator, LuxR family
anamox3_curated_scaffold_2227_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3121..3732
DNA (612bp) protein (204aa)
Two component transcriptional regulator, LuxR family Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TIY2_NIAKG
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIC94833.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
two component transcriptional regulator, LuxR family
anamox3_curated_scaffold_2227_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3976..5850)
DNA (1875bp) protein (625aa)
Outer membrane protein Tax=Bacteroidales RepID=D7ITS4_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI08224.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
ragb/susd domain-containing protein
anamox3_curated_scaffold_2227_7
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5828..9166)
DNA (3339bp) protein (1113aa)
SusC/RagA family TonB-linked outer membrane protein Tax=Parabacteroides sp. D25 RepID=K6BMG1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ86381.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TonB-dependent receptor plug
anamox3_curated_scaffold_2227_8
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10656..11027
DNA (372bp) protein (124aa)
Oxidoreductase domain protein bin=GWF2_Bacteroidetes_41_9 species=Runella slithyformis genus=Runella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
oxidoreductase domain protein
Tax=GWA2_Bacteroidetes_40_15_curated
anamox3_curated_scaffold_2227_9

Not on your lists

comp(11549..12406)
DNA (858bp) protein (286aa)
hypothetical protein Tax=Niabella aurantiaca RepID=UPI0003778910
Lipase {ECO:0000313|EMBL:BAH86065.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
esterase/lipase
anamox3_curated_scaffold_2227_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13040..13504
DNA (465bp) protein (155aa)
Putative uncharacterized protein Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y047_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU04759.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
Displaying 10 items

View Taxonomy