ggKbase home page

anamox3_curated_scaffold_1419

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1419_1
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

382..1581
DNA (1200bp) protein (400aa)
PDZ/DHR/GLGF domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF52_NIAKG
Signal protein PDZ {ECO:0000313|EMBL:KIC91089.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
PDZ/DHR/GLGF domain-containing protein
anamox3_curated_scaffold_1419_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1649..2896
DNA (1248bp) protein (416aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003758396
peptidase M16 domain-containing protein
Peptidase M16 domain protein {ECO:0000313|EMBL:ACU58202.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox3_curated_scaffold_1419_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2905..4185
DNA (1281bp) protein (427aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036D8B88
Peptidase M16 {ECO:0000313|EMBL:KIC96441.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
peptidase M16 domain-containing protein
anamox3_curated_scaffold_1419_4
unknown

Not on your lists

comp(4287..5201)
DNA (915bp) protein (305aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI0002D5431B
anamox3_curated_scaffold_1419_5
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5241..6983)
DNA (1743bp) protein (581aa)
Putative uncharacterized protein Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RR91_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17577.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15).;"
anamox3_curated_scaffold_1419_6
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7013..10171)
DNA (3159bp) protein (1053aa)
TonB-dependent receptor plug Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KRS5_HALH1
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AEE50029.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox3_curated_scaffold_1419_7
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10526..12862)
DNA (2337bp) protein (779aa)
Exporter of the RND superfamily protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI3_NIAKG
RND transporter {ECO:0000313|EMBL:KIC89679.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
RND superfamily exporter
anamox3_curated_scaffold_1419_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13004..13738
DNA (735bp) protein (245aa)
DNA repair protein RecO Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI5_NIAKG
DNA replication and repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_1419_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13757..14065)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL63_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01904.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_1419_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14089..14250)
DNA (162bp) protein (54aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TL62_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01903.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_1419_11

Not on your lists

14453..15172
DNA (720bp) protein (240aa)
HAD-superfamily hydrolase, subfamily IIB Tax=Sphingobacterium sp. (strain 21) RepID=F4CFJ8_SPHS2
Uncharacterized protein {ECO:0000313|EMBL:KKN99448.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
HAD superfamily hydrolase
anamox3_curated_scaffold_1419_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15354..17396
DNA (2043bp) protein (681aa)
peptide transporter Tax=Niabella aurantiaca RepID=UPI00037B49B4
peptide transporter
Peptide transporter {ECO:0000313|EMBL:AHF15832.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox3_curated_scaffold_1419_13
unknown

Not on your lists

17563..17799
DNA (237bp) protein (79aa)

This feature has no annotations

anamox3_curated_scaffold_1419_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17910..18338
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB92_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02475.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_1419_15
unknown

Not on your lists

comp(18362..18586)
DNA (225bp) protein (75aa)

This feature has no annotations

anamox3_curated_scaffold_1419_16
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18606..19151)
DNA (546bp) protein (182aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037F1366
Glycoside hydrolase {ECO:0000313|EMBL:KIC94808.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
lysozyme
anamox3_curated_scaffold_1419_17
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19438..19671)
DNA (234bp) protein (78aa)
ABC transporter related Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PL22_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU63932.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying 17 items

View Taxonomy