ggKbase home page

anamox3_curated_scaffold_4342

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_4342_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1..402)
DNA (402bp) protein (134aa)
Uncharacterized protein Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ29_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60113.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox3_curated_scaffold_4342_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

802..1497
DNA (696bp) protein (232aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037E85A0
adenylate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
anamox3_curated_scaffold_4342_3
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1500..1952)
DNA (453bp) protein (151aa)
Uncharacterized protein Tax=Pedobacter sp. BAL39 RepID=A6EC97_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC96335.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
anamox3_curated_scaffold_4342_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2070..2855
DNA (786bp) protein (262aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000371AAA1
Enoyl-CoA hydratase {ECO:0000313|EMBL:KIC90883.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Enoyl-CoA hydratase/isomerase
anamox3_curated_scaffold_4342_5
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2894..4177)
DNA (1284bp) protein (428aa)
Gluconate transporter Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TBI0_NIAKG
gluconate transporter
Gluconate transporter {ECO:0000313|EMBL:AEW03480.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_4342_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4276..4743)
DNA (468bp) protein (156aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI0003624B8D
Uncharacterized protein {ECO:0000313|EMBL:GAO41636.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
anamox3_curated_scaffold_4342_7
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4830..6113)
DNA (1284bp) protein (428aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQG6_NIAKG
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
anamox3_curated_scaffold_4342_8
Polaribacter sp. Hel1_33_49, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6223..6996)
DNA (774bp) protein (258aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein Tax=Rudanella lutea RepID=UPI00037383DE
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:KGL59761.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. Hel1_33_49.;"
anamox3_curated_scaffold_4342_9
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7199..8683
DNA (1485bp) protein (495aa)
RNA polymerase, sigma 54 subunit, RpoN/SigL Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB80_NIAKG
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KIC94813.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
RNA polymerase, sigma 54 subunit, RpoN/SigL
anamox3_curated_scaffold_4342_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8680..9339
DNA (660bp) protein (220aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00036636E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02462.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_4342_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9378..9671)
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF49_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW02669.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_4342_12
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9738..10175)
DNA (438bp) protein (146aa)
Multi-sensor hybrid histidine kinase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TF50_NIAKG
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AEW02670.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_4342_13
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10423..11355)
DNA (933bp) protein (311aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction DNA helicase RuvB Tax=Segetibacter koreensis RepID=UPI00037F18AD
Displaying 13 items

View Taxonomy