ggKbase home page

anamox3_curated_scaffold_3866

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_3866_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

3..1133
DNA (1131bp) protein (377aa)
PKD domain-containing protein Tax=Imtechella halotolerans K1 RepID=I0WE99_9FLAO
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox3_curated_scaffold_3866_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1800..2168
DNA (369bp) protein (123aa)
Putative membrane protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T8F4_NIAKG
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AEV99124.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_3866_3
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2192..4180
DNA (1989bp) protein (663aa)
OmpA/MotB domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9L6_NIAKG
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:AEW00209.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_3866_4
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4281..5342)
DNA (1062bp) protein (354aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components Tax=Chthonomonas calidirosea T49 RepID=S0EZZ7_9BACT
ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Putative nitrate transport protein {ECO:0000313|EMBL:KFE64872.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
anamox3_curated_scaffold_3866_5
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(5443..6168)
DNA (726bp) protein (242aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component Tax=Chthonomonas calidirosea T49 RepID=S0EWU8_9BACT
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component {ECO:0000313|EMBL:CCW36239.1}; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
anamox3_curated_scaffold_3866_6
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6158..6946)
DNA (789bp) protein (263aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component Tax=Chthonomonas calidirosea T49 RepID=S0EXM3_9BACT
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component {ECO:0000313|EMBL:KFE64874.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
anamox3_curated_scaffold_3866_7
unknown

Not on your lists

7021..7260
DNA (240bp) protein (80aa)

This feature has no annotations

anamox3_curated_scaffold_3866_8
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(7407..10085)
DNA (2679bp) protein (893aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
Valine--tRNA ligase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TD88_NIAKG
valyl-tRNA synthetase
anamox3_curated_scaffold_3866_9
unknown

Not on your lists

comp(10285..10389)
DNA (105bp) protein (35aa)

This feature has no annotations

anamox3_curated_scaffold_3866_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10712..10933
DNA (222bp) protein (74aa)
DNA polymerase III, epsilon subunit {ECO:0000313|EMBL:ACU62927.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ACU62927.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
hypothetical protein Tax=Pedobacter arcticus RepID=UPI00031B2126
DNA polymerase III subunit epsilon
Displaying 10 items

View Taxonomy