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anamox3_curated_scaffold_1560

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1560_1
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1..150
DNA (150bp) protein (50aa)
id=3521942 bin=GWF2_Ignavibacteria_35_20 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox3_curated_scaffold_1560_2
unknown

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185..694
DNA (510bp) protein (170aa)

This feature has no annotations

anamox3_curated_scaffold_1560_3
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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710..1117
DNA (408bp) protein (136aa)
Tax=RBG_16_Ignavibacteria_36_9_curated
anamox3_curated_scaffold_1560_4
unknown

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1143..2132
DNA (990bp) protein (330aa)
transmembrane_regions bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
anamox3_curated_scaffold_1560_5
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3175..3438
DNA (264bp) protein (88aa)
Acriflavin resistance protein bin=GWF2_Bacteroidetes_41_31 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
acriflavin resistance protein
Tax=GWF2_Bacteroidetes_41_31_curated
anamox3_curated_scaffold_1560_6
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3834..4412
DNA (579bp) protein (193aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
anamox3_curated_scaffold_1560_7
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4426..4887
DNA (462bp) protein (154aa)
Putative uncharacterized protein bin=GWF2_Bacteroidetes_41_31 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
hypothetical protein
Tax=GWF2_Bacteroidetes_41_31_curated
anamox3_curated_scaffold_1560_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

5416..5799
DNA (384bp) protein (128aa)
Putative uncharacterized protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1P8_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
anamox3_curated_scaffold_1560_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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5747..6103
DNA (357bp) protein (119aa)
Helix-turn-helix domain protein bin=GWF2_Bacteroidetes_33_16 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
merR; transcriptional regulator
Tax=GWE2_Bacteroidetes_32_14_curated
anamox3_curated_scaffold_1560_10
unknown

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comp(6887..7150)
DNA (264bp) protein (88aa)

This feature has no annotations

anamox3_curated_scaffold_1560_11
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

7239..7625
DNA (387bp) protein (129aa)
hypothetical protein Tax=Anaerophaga thermohalophila RepID=UPI000304C6C9
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
anamox3_curated_scaffold_1560_12
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7672..7971
DNA (300bp) protein (100aa)
Thioredoxin Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W4_SPHS2
Thioredoxin {ECO:0000313|EMBL:KEQ30755.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
thioredoxin
anamox3_curated_scaffold_1560_13
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8006..8506)
DNA (501bp) protein (167aa)
Cold-shock DNA-binding protein family protein Tax=Pontibacter sp. BAB1700 RepID=J0VAI5_9BACT
Putative cold shock protein {ECO:0000313|EMBL:GAO43832.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
DNA-binding protein
anamox3_curated_scaffold_1560_trna_1
unknown

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comp(8773..8845)
DNA (73bp)
transferRNA Lys
anamox3_curated_scaffold_1560_14
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8992..9858
DNA (867bp) protein (289aa)
Hydroxymethylglutaryl-CoA lyase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR02_NIAKG
Hydroxymethylglutaryl-CoA lyase {ECO:0000313|EMBL:KIC95036.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Hydroxymethylglutaryl-CoA lyase
anamox3_curated_scaffold_1560_15
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9860..10873
DNA (1014bp) protein (338aa)
GSCFA domain protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TR03_NIAKG
GSCFA domain-containing protein
GSCFA domain protein {ECO:0000313|EMBL:AEV97902.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_1560_16
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10890..11363)
DNA (474bp) protein (158aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Ribosomal RNA large subunit methyltransferase H Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9R6_NIAKG
ribosomal RNA large subunit methyltransferase H
anamox3_curated_scaffold_1560_17
Pseudoalteromonas piscicida, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11455..12729)
DNA (1275bp) protein (425aa)
Probable glycosyltransferase Tax=Vibrio orientalis CIP 102891 = ATCC 33934 RepID=C9QDF6_VIBOR
Uncharacterized protein {ECO:0000313|EMBL:KJY90474.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas piscicida.;"
glycosyltransferase
anamox3_curated_scaffold_1560_18
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12800..13600)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Mogibacterium sp. CM50 RepID=J5WMI2_9FIRM
Tax=GWA2_Bacteroidetes_30_7_curated
anamox3_curated_scaffold_1560_19
Prevotella marshii, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13629..14456)
DNA (828bp) protein (276aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFM01006.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFM01006.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella marshii DSM 16973 = JCM 13450.;"
Glycosyltransferase, group 2 family protein Tax=Prevotella marshii DSM 16973 RepID=E0NV08_9BACT
Glycosyltransferases involved in cell wall biogenesis
anamox3_curated_scaffold_1560_20
Bacteroides cellulosilyticus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14477..15607)
DNA (1131bp) protein (377aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEF88892.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEF88892.1};; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides cellulosilyticus DSM 14838.;"
glycosyltransferase Tax=Alistipes sp. JC136 RepID=UPI000288B356
glycosyltransferase
anamox3_curated_scaffold_1560_21
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15847..17016)
DNA (1170bp) protein (390aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HDE7_ACTM4
Uncharacterized protein {ECO:0000313|EMBL:ETZ24552.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
anamox3_curated_scaffold_1560_22
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17036..17629)
DNA (594bp) protein (198aa)
Bacterial sugar transferase Tax=Parabacteroides RepID=E1YNY0_9PORP
Glycosyl transferase {ECO:0000313|EMBL:KGN70206.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-239 OH1446.;"
glycosyltransferase
anamox3_curated_scaffold_1560_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17610..18110)
DNA (501bp) protein (167aa)
capsular polysaccharide biosynthesis protein Tax=Bacteroides gallinarum RepID=UPI000375417D
Capsular biosynthesis protein {ECO:0000313|EMBL:KER52434.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
aminotransferase
Displaying 24 items

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