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anamox3_curated_scaffold_2934

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_2934_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3..482)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003731FFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49163.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox3_curated_scaffold_2934_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1653..2591)
DNA (939bp) protein (313aa)
Dihydrodipicolinate synthetase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFA1_NIAKG
dihydrodipicolinate synthetase
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:AEV97311.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2934_3
unknown

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3460..4071
DNA (612bp) protein (204aa)

This feature has no annotations

anamox3_curated_scaffold_2934_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4390..5277
DNA (888bp) protein (296aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI0003645117
Uncharacterized protein {ECO:0000313|EMBL:EKN12618.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
AraC family transcriptional regulator
anamox3_curated_scaffold_2934_5
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

5340..6158
DNA (819bp) protein (273aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
2-dehydro-3-deoxyphosphooctonate aldolase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TJJ7_NIAKG
2-dehydro-3-deoxyphosphooctonate aldolase
anamox3_curated_scaffold_2934_6
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6238..6780
DNA (543bp) protein (181aa)
tRNA/rRNA methyltransferase (SpoU) Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI78_NIAKG
Putative RNA methyltransferase {ECO:0000313|EMBL:GAO43594.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
tRNA/rRNA methyltransferase SpoU
anamox3_curated_scaffold_2934_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6850..8037
DNA (1188bp) protein (396aa)
Abortive infection protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EMH2_RUNSL
abortive infection protein
Abortive infection protein {ECO:0000313|EMBL:AEI50943.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox3_curated_scaffold_2934_8
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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8168..8572
DNA (405bp) protein (135aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
Holliday junction resolvase Tax=Niabella aurantiaca RepID=UPI0003716BB9
Holliday junction resolvase
anamox3_curated_scaffold_2934_9
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8575..9477)
DNA (903bp) protein (301aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI0003628F1E
Regucalcin-like protein {ECO:0000313|EMBL:EJF08137.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
anamox3_curated_scaffold_2934_10
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9682..10581
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TI69_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW00686.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
anamox3_curated_scaffold_2934_11
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10739..11614
DNA (876bp) protein (292aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI00037FF701
Uncharacterized protein {ECO:0000313|EMBL:KIC93750.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox3_curated_scaffold_2934_12
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12553..12966
DNA (414bp) protein (138aa)
heparan-alpha-glucosaminide N-acetyltransferase Tax=Rudanella lutea RepID=UPI000362B108
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI49191.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
anamox3_curated_scaffold_2934_13
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

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comp(12998..13384)
DNA (387bp) protein (129aa)
dTDP-4-dehydrorhamnose reductase Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD8_NIAKG
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KIF31202.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
dTDP-4-dehydrorhamnose reductase
Displaying 13 items

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