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anamox3_curated_scaffold_1643

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox3_curated_scaffold_1643_1
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(293..907)
-----------------
DNA (615bp)
protein (205aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI0003730094
Lipid-binding protein {ECO:0000313|EMBL:KGE86356.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
hypothetical protein
anamox3_curated_scaffold_1643_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1019..1471)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00037BC9B9
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AKD05645.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
anamox3_curated_scaffold_1643_3
Cesiribacter andamanensis, Cesiribacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

2112..3305
-----------------
DNA (1194bp)
protein (398aa)
Poly-beta-1,6-N-acetyl-D-glucosamine synthase {ECO:0000313|EMBL:EMR04639.1}; EC=2.4.1.- {ECO:0000313|EMBL:EMR04639.1};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Cesiribacter.;" source="Cesiribacter andamanensis AMV16.;"
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00037379A5
family 2 glycosyl transferase
anamox3_curated_scaffold_1643_4
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3491..4081)
-----------------
DNA (591bp)
protein (197aa)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
phosphoheptose isomerase (EC:5.3.1.-)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI0003648B96
anamox3_curated_scaffold_1643_5
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4078..5652)
-----------------
DNA (1575bp)
protein (525aa)
hisS; histidyl-tRNA synthetase HisS (EC:6.1.1.21)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
Histidine--tRNA ligase Tax=Octadecabacter antarcticus 307 RepID=M9R999_9RHOB
anamox3_curated_scaffold_1643_trna_1
unknown

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comp(5814..5887)
-----------------
DNA (74bp)
transferRNA His
anamox3_curated_scaffold_1643_6
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6421..8343)
-----------------
DNA (1923bp)
protein (641aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00036D00C1
Glycosyl transferase family 2 {ECO:0000313|EMBL:KGE85188.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
ABC transporter
anamox3_curated_scaffold_1643_7
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(8687..8929)
-----------------
DNA (243bp)
protein (81aa)
Uncharacterized protein Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPE5_EMTOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK01548.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
anamox3_curated_scaffold_1643_8
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8997..10994)
-----------------
DNA (1998bp)
protein (666aa)
Riboflavin biosynthesis protein RibF {ECO:0000313|EMBL:AEE54321.1}; EC=2.7.1.26 {ECO:0000313|EMBL:AEE54321.1};; EC=2.7.7.2 {ECO:0000313|EMBL:AEE54321.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Riboflavin biosynthesis protein RibF Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSH0_HALH1
riboflavin biosynthesis protein RibF
anamox3_curated_scaffold_1643_9
Aphanocapsa montana, Aphanocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11311..12405
-----------------
DNA (1095bp)
protein (365aa)
ATPase-like, ParA/MinD Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSG9_HALH1
Mrp {ECO:0000313|EMBL:KIF26594.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Aphanocapsa.;" source="Aphanocapsa montana BDHKU210001.;"
ParA/MinD ATPase-like protein
anamox3_curated_scaffold_1643_10
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12669..12932
-----------------
DNA (264bp)
protein (88aa)
Nitrogen-fixing NifU domain protein Tax=Saprospira grandis (strain Lewin) RepID=H6KZ54_SAPGL
nitrogen-fixing NifU domain-containing protein
Thioredoxin-like protein {ECO:0000313|EMBL:EJF54355.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM 2844.;"
anamox3_curated_scaffold_1643_11
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13005..13826
-----------------
DNA (822bp)
protein (274aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
Orotidine 5'-phosphate decarboxylase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSG7_HALH1
orotidine 5'-phosphate decarboxylase
anamox3_curated_scaffold_1643_12
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14155..15033
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein Tax=Saprospira grandis DSM 2844 RepID=J1I6I8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC93750.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
anamox3_curated_scaffold_1643_13
unknown

Not on your lists

comp(15217..15789)
-----------------
DNA (573bp)
protein (191aa)

This feature has no annotations

anamox3_curated_scaffold_1643_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15804..17570)
-----------------
DNA (1767bp)
protein (589aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00037254B5
ASPIC/UnbV domain protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:AHG89789.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
anamox3_curated_scaffold_1643_15
BJP_IG2102_Flavobacteriales_34_12, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17623..19176)
-----------------
DNA (1554bp)
protein (518aa)
hypothetical protein Tax=Polaribacter franzmannii RepID=UPI00037B418E
ASPIC/UnbV domain-containing protein
Tax=BJP_IG2102_Flavobacteriales_34_12
anamox3_curated_scaffold_1643_16
unknown

Not on your lists

comp(19416..19571)
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

anamox3_curated_scaffold_1643_17
CG_Bacteroid_01, Bacteroidetes, Bacteria

Not on your lists

19680..20636
-----------------
DNA (957bp)
protein (319aa)
Putative uncharacterized protein bin=GWE2_Bacteroidetes_42_42 species=Fluviicola taffensis genus=Fluviicola taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=CG_Bacteroid_01
anamox3_curated_scaffold_1643_18
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20716..21111)
-----------------
DNA (396bp)
protein (132aa)
Cytochrome c class I Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KTW3_HALH1
Uncharacterized protein {ECO:0000313|EMBL:KGE86178.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
cytochrome c class I
anamox3_curated_scaffold_1643_19
Lyngbya confervoides, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21101..21706)
-----------------
DNA (606bp)
protein (202aa)
Electron transport protein SCO1/SenC Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L568_HALH1
Electron transporter SenC {ECO:0000313|EMBL:KIF43063.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;" source="Lyngbya confervoides BDU141951.;"
electron transport protein SCO1/SenC
anamox3_curated_scaffold_1643_20
unknown

Not on your lists

comp(21781..22038)
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

anamox3_curated_scaffold_1643_21
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22233..22655)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KGE85112.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
anamox3_curated_scaffold_1643_22
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23071..24279)
-----------------
DNA (1209bp)
protein (403aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00037654F4
Glycosyl transferase family 1 {ECO:0000313|EMBL:KGE86684.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
group 1 glycosyl transferase
anamox3_curated_scaffold_1643_23
R_Nitrospirae_40_19, Nitrospirae, Bacteria

Not on your lists

comp(24313..24687)
-----------------
DNA (375bp)
protein (125aa)
Mannose-6-phosphate isomerase Tax=Rubidibacter lacunae KORDI 51-2 RepID=U5DCE6_9CHRO
cupin
Tax=RIFCSPHIGHO2_02_FULL_Nitrospirae_40_19_curated
anamox3_curated_scaffold_1643_24
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25410..26555)
-----------------
DNA (1146bp)
protein (382aa)
hypothetical protein Tax=Lewinella cohaerens RepID=UPI00036F37B0
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KGE87173.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xiamenensis.;"
alkyl hydroperoxide reductase
anamox3_curated_scaffold_1643_25
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26821..29022)
-----------------
DNA (2202bp)
protein (734aa)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formylglycinamide ribonucleotide amidotransferase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; Glutamine amidotransferase PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Phosphoribosylformylglycinamidine synthase subunit II {ECO:0000256|HAMAP-Rule:MF_00420}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
Phosphoribosylformylglycinamidine synthase 2 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L4S4_HALH1
phosphoribosylformylglycinamidine synthase 2
Displaying 26 items

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