ggKbase home page

anamox1_curated_scaffold_621

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_621_1
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

4047..4217
DNA (171bp) protein (57aa)
hypothetical protein Tax=Clostridium botulinum RepID=UPI0003643E54
Tax=CG_Magasa_02
anamox1_curated_scaffold_621_2
RifOxyA12_full_OD1_Moranbacteria_35_19_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

4311..4865
DNA (555bp) protein (185aa)
hypothetical protein Tax=Clostridium botulinum RepID=UPI0002E8DDBE
Tax=RifOxyA12_full_OD1_Moranbacteria_35_19_curated
anamox1_curated_scaffold_621_3
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(4860..6422)
DNA (1563bp) protein (521aa)
kko:Kkor_1707 DNA-cytosine methyltransferase (EC:2.1.1.37); K00558 DNA (cytosine-5-)-methyltransferase [EC:2.1.1.37] bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Modification methylase Bsp6I
Tax=CG_TM7_01
anamox1_curated_scaffold_621_4
R_OD1_Magasanikbacteria_44_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

6603..7646
DNA (1044bp) protein (348aa)
Putative uncharacterized protein bin=GWA2_Elusi_like_61_42 species=Pseudoalteromonas tunicata genus=Pseudoalteromonas taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
uncharacterized protein, microcin C7 resistance protein MccF-like protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_44_11_curated
anamox1_curated_scaffold_621_5
RIFOXYA2_FULL_RIF_OD1_01_38_24_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

7879..8499
DNA (621bp) protein (207aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000376C385
putative transporter protein
Tax=RIFOXYA2_FULL_RIF_OD1_01_38_24_curated
anamox1_curated_scaffold_621_6
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

8450..8971
DNA (522bp) protein (174aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000376C385
major facilitator transporter
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
anamox1_curated_scaffold_621_7
GWF1_WS6_36_8, WS6, Bacteria

Not on your lists

comp(9039..9743)
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ16065.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_36_8.;"
Putative uncharacterized protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
hypothetical protein
anamox1_curated_scaffold_621_8
Wohlfahrtiimonas chitiniclastica, Wohlfahrtiimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9862..10326
DNA (465bp) protein (155aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Wohlfahrtiimonas.;" source="Wohlfahrtiimonas chitiniclastica SH04.;"
hypothetical protein Tax=Wohlfahrtiimonas chitiniclastica RepID=UPI0003827914
NUDIX hydrolase
anamox1_curated_scaffold_621_9
R_RIF_OD1_08_40_12b, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

10536..11174
DNA (639bp) protein (213aa)
DNA methylase N-4/N-6 domain protein Tax=Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) RepID=G7V6T6_THELD
DNA methylase N-4/N-6 domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_08_40_12b_curated
anamox1_curated_scaffold_621_10
CG_Falkow_03, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

11171..11785
DNA (615bp) protein (205aa)
hsdR; type II restriction enzyme R protein; K01155 type II restriction enzyme [EC:3.1.21.4] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Type II restriction endonuclease BstXII
Tax=CG_Falkow_03
anamox1_curated_scaffold_621_11
BJP_IG2158_OD1_28_51, Parcubacteria, Bacteria

Not on your lists

11763..12101
DNA (339bp) protein (113aa)
hsdR; type II restriction enzyme R protein; K01155 type II restriction enzyme [EC:3.1.21.4] bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Type II restriction endonuclease BstXII
Tax=BJP_IG2158_OD1_28_51
anamox1_curated_scaffold_621_12
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12091..13014
DNA (924bp) protein (308aa)
Site-specific DNA-methyltransferase (adenine-specific) {ECO:0000256|RuleBase:RU361257}; EC=2.1.1.72 {ECO:0000256|RuleBase:RU361257};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter thermohydrosulfuricus WC1.;"
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase (Dam) Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CXC1_THETY
anamox1_curated_scaffold_621_13
unknown

Not on your lists

comp(13095..14618)
DNA (1524bp) protein (508aa)

This feature has no annotations

anamox1_curated_scaffold_621_14
unknown

Not on your lists

comp(14704..16188)
DNA (1485bp) protein (495aa)

This feature has no annotations

anamox1_curated_scaffold_621_15
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

16273..16620
DNA (348bp) protein (116aa)
Putative uncharacterized protein Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D235_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG17901.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
anamox1_curated_scaffold_621_16
unknown

Not on your lists

comp(16617..18005)
DNA (1389bp) protein (463aa)

This feature has no annotations

anamox1_curated_scaffold_621_17
Bacillus cytotoxicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18285..18638
DNA (354bp) protein (118aa)
Diacylglycerol kinase Tax=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) RepID=A7GSZ6_BACCN
diacylglycerol kinase
Diacylglycerol kinase {ECO:0000313|EMBL:ABS23254.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus subsp. cytotoxis (strain NVH 391-98).;"
anamox1_curated_scaffold_621_18
unknown

Not on your lists

18758..19492
DNA (735bp) protein (245aa)

This feature has no annotations

anamox1_curated_scaffold_621_19
GWC1_OP11_44_23, Microgenomates, Bacteria

Not on your lists

comp(19571..19822)
DNA (252bp) protein (84aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT55219.1}; species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_44_23.;"
anamox1_curated_scaffold_621_20
Methanococcus aeolicus, Methanococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(19859..20776)
DNA (918bp) protein (306aa)
Uncharacterized protein Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=A6UV70_META3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR56392.1}; species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanococcus.;" source="Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280).;"
anamox1_curated_scaffold_621_21
RIFOXYB1_FULL_OP11_Woesebacteria_38_16_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(20779..22020)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVB7_9BACT bin=ACD13 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFOXYB1_FULL_OP11_Woesebacteria_38_16_curated
anamox1_curated_scaffold_621_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22141..22878
DNA (738bp) protein (246aa)
hypothetical protein; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
16S ribosomal RNA methyltransferase RsmE
anamox1_curated_scaffold_621_23
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22882..24033)
DNA (1152bp) protein (384aa)
ackA; acetate kinase (EC:2.7.2.1)
acetate kinase A/propionate kinase 2 bin=GWF2_Bacteroidetes_42_66 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
Tax=GWE2_Bacteroidetes_42_39_curated
anamox1_curated_scaffold_621_24
GWA2_PER_44_7, Peregrinibacteria, Bacteria

Not on your lists

comp(24034..26391)
DNA (2358bp) protein (786aa)
phosphoketolase; K01636 [EC:4.1.2.-] bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase {ECO:0000313|EMBL:KKT76681.1}; species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_44_7.;"
phosphoketolase
anamox1_curated_scaffold_621_25
unknown

Not on your lists

26695..27456
DNA (762bp) protein (254aa)

This feature has no annotations

anamox1_curated_scaffold_621_26

Not on your lists

27528..28469
DNA (942bp) protein (314aa)
Putative uncharacterized protein Tax=uncultured organism HF70_19B12 RepID=Q2Q0F6_9ZZZZ
Exopolyphosphatase-related protein {ECO:0000313|EMBL:AIF00192.1}; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_12_E09.;"
hypothetical protein
anamox1_curated_scaffold_621_27
R_OP11_Gottesmanbacteria_43_11b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

28531..28896
DNA (366bp) protein (122aa)
id=5102695 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_43_11b_curated
anamox1_curated_scaffold_621_28

Not on your lists

28909..30222
DNA (1314bp) protein (438aa)
protein translocase subunit yidC; K03217 preprotein translocase subunit YidC bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:EKE19481.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
anamox1_curated_scaffold_621_29
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30209..30712
DNA (504bp) protein (168aa)
protein jag; K06346 spoIIIJ-associated protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
R3H domain protein {ECO:0000313|EMBL:CDB74186.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:265.;"
jag; jag protein
anamox1_curated_scaffold_621_30
R_Berkelbacteria_36_9, Berkelbacteria, Bacteria

Not on your lists


30731..31375
DNA (645bp) protein (215aa)
ctc; 50S ribosomal protein L25/general stress protein Ctc; K02897 large subunit ribosomal protein L25 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
50S ribosomal protein L25
Tax=RIFCSPHIGHO2_12_FULL_Berkelbacteria_36_9_curated
Displaying items 1-30 of 38 in total

View Taxonomy