ggKbase home page

anamox1_curated_scaffold_1326_22

Organism: anamox1_Bacteria_33_9_curated

near complete RP 46 / 55 BSCG 46 / 51 ASCG 11 / 38
Location: 18256..19173

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 296.0
  • Bit_score: 297
  • Evalue 1.50e-77
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 304.0
  • Bit_score: 219
  • Evalue 3.30e-54
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 301.0
  • Bit_score: 215
  • Evalue 1.70e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leptotrichia sp. oral taxon 215 → Leptotrichia → Fusobacteriales → Fusobacteriia → Fusobacteria → Bacteria

Sequences

DNA sequence
Length: 918
ATGGAAAAAAATATGATAGTTGATGAGAATAGGCAAGGGGAACGACTAGATTTATTTATAACATTTTCAGTAGATACTTTAACCAGGTCTATAATCAAAAAACAGATAGAAACTGGGAATGTTTTTGTAAATGGAACTATTGAGTATAAGCCTAACTATAAGGTCAAAACGGGTGACAATATTATTTGTAAATTTGTATTACCTGATAAAGCAACAAATATTATTAAGCCCGAAAAAATTAAATTAGATATTATTTATGAAGATGAGCACTTAATAGTAGTGAATAAACCTATTGGAATGGTAGTGCATCCAGCGACGTCTAATTGGAGTGGAACTCTACTTAATGCCTTAATGAATCGCTATTCAGAACTAGCTACAACAGGAGATAGTCTGAGACAAGGACTAATTCATAGACTGGATAAAGATACATCTGGCTTGATTCTAGTTAGTAAGACTAACGAAGGCTTGTGGTATTATTCGAAACTATTTAGCGACAGAAAGGTTGAAAAAAAATATTTAGCTGTTGTAAAAGGAAATTTTATTAGTAAAATTGGAGATACAAAACTTGAGATCGAAAATTATATCGGGCGTAATCAAAGTAATAGACGTAAGTTTACAAAAGTCCCTCCAAGTAAGGGTAAGTTAGCAGTTACAAAGATAGAGTTTTTACAATTTTTATACTTAGACGATAAAGAGTACTCCTTGTTGCAAGTAACTCCGATAACGGGGCGAACTCATCAAATTAGAGTCCATCTTTCAACAATAGGATTGCCCATATTAGGTGATAAAGTTTATGGGAAAGGGAATAATTATCAAAGGCTGATGTTGCATTCATGGAAACTTAGACTGATATTACTAGGTGGTAAAGAAAAAGAGTTTGTTGCTCCACCAGATAAGTTATTTTGGGTTCTAAAATGA
PROTEIN sequence
Length: 306
MEKNMIVDENRQGERLDLFITFSVDTLTRSIIKKQIETGNVFVNGTIEYKPNYKVKTGDNIICKFVLPDKATNIIKPEKIKLDIIYEDEHLIVVNKPIGMVVHPATSNWSGTLLNALMNRYSELATTGDSLRQGLIHRLDKDTSGLILVSKTNEGLWYYSKLFSDRKVEKKYLAVVKGNFISKIGDTKLEIENYIGRNQSNRRKFTKVPPSKGKLAVTKIEFLQFLYLDDKEYSLLQVTPITGRTHQIRVHLSTIGLPILGDKVYGKGNNYQRLMLHSWKLRLILLGGKEKEFVAPPDKLFWVLK*