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anamox1_curated_scaffold_1326

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1326_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

59..601
DNA (543bp) protein (181aa)
Recombination protein RecR bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
recombination protein recr
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
anamox1_curated_scaffold_1326_2
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

777..2234
DNA (1458bp) protein (486aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Polynucleotide adenylyltransferase/metal dependent phosphohydrolase {ECO:0000313|EMBL:KKQ35093.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
polyA polymerase family protein
anamox1_curated_scaffold_1326_3
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

2263..3654
DNA (1392bp) protein (464aa)
metallo-beta-lactamase; K07576 metallo-beta-lactamase family protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:KKQ35092.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
hypothetical protein
anamox1_curated_scaffold_1326_4
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3714..4820
DNA (1107bp) protein (369aa)
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
GTP-binding protein YchF
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
anamox1_curated_scaffold_1326_5
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists


4928..5209
DNA (282bp) protein (94aa)
30S ribosomal protein S6; K02990 small subunit ribosomal protein S6 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
30S ribosomal protein S6 {ECO:0000313|EMBL:KKQ35088.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
30S ribosomal protein S6
anamox1_curated_scaffold_1326_6
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

5238..5735
DNA (498bp) protein (166aa)
single-strand binding protein; K03111 single-strand DNA-binding protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKQ35087.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
hypothetical protein
anamox1_curated_scaffold_1326_7
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists


5745..5987
DNA (243bp) protein (81aa)
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
30S ribosomal protein S18 {ECO:0000313|EMBL:KKQ35086.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
SSU ribosomal protein S18p
anamox1_curated_scaffold_1326_8
unknown

Not on your lists

6014..7948
DNA (1935bp) protein (645aa)

This feature has no annotations

anamox1_curated_scaffold_1326_9
GWA2_WS6_37_6, WS6, Bacteria

Not on your lists

7941..9149
DNA (1209bp) protein (403aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Carboxy-terminal-processing protease {ECO:0000313|EMBL:KKQ35084.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWA2_37_6.;"
prc; carboxyl-terminal protease
anamox1_curated_scaffold_1326_10
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9133..10008)
DNA (876bp) protein (292aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
prmC; protein-(glutamine-N5) methyltransferase, release factor-specific (EC:2.1.1.-)
Release factor glutamine methyltransferase Tax=Clostridium sp. CAG:567 RepID=R7MC12_9CLOT
anamox1_curated_scaffold_1326_11
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10019..11059)
DNA (1041bp) protein (347aa)
peptide chain release factor 1; K02835 peptide chain release factor 1 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643.;"
anamox1_curated_scaffold_1326_12
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists


comp(11065..11385)
DNA (321bp) protein (107aa)
rpmE; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
50S ribosomal protein L31 {ECO:0000313|EMBL:KKR06315.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
rpmE; 50S ribosomal protein L31 RpmE
anamox1_curated_scaffold_1326_13
unknown

Not on your lists

11518..12066
DNA (549bp) protein (183aa)

This feature has no annotations

anamox1_curated_scaffold_1326_14
R_SM2F11_43_23, SM2F11, Bacteria

Not on your lists

12076..13392
DNA (1317bp) protein (439aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
replicative DNA helicase
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_43_23_curated
anamox1_curated_scaffold_1326_15
unknown

Not on your lists

13437..13775
DNA (339bp) protein (113aa)
id=5101885 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
anamox1_curated_scaffold_1326_16
unknown

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13796..14281
DNA (486bp) protein (162aa)

This feature has no annotations

anamox1_curated_scaffold_1326_trna_1
unknown

Not on your lists

14389..14474
DNA (86bp)
transferRNA Leu
anamox1_curated_scaffold_1326_17
GWB1_OP11_41_15, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

14497..15060
DNA (564bp) protein (188aa)
elongation factor P Tax=Actinobaculum urinale RepID=UPI0003B6D455
Elongation factor P {ECO:0000313|EMBL:KKR93538.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWB1_41_15.;"
elongation factor P
anamox1_curated_scaffold_1326_18
RIFOXYB1_FULL_WS6_33_14_curated, Dojkabacteria, Bacteria

Not on your lists

15082..15759
DNA (678bp) protein (226aa)
transmembrane_regions bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Tax=RIFOXYB1_FULL_WS6_33_14_curated
anamox1_curated_scaffold_1326_19
R_OD1_Nomurabacteria_33_12, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

15756..17048
DNA (1293bp) protein (431aa)
peptidase M16 domain-containing protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Zn-dependent peptidase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_33_12_curated
anamox1_curated_scaffold_1326_20
unknown

Not on your lists

17032..17892
DNA (861bp) protein (287aa)

This feature has no annotations

anamox1_curated_scaffold_1326_21

Not on your lists

17889..18278
DNA (390bp) protein (130aa)
lipoprotein signal peptidase; K03101 signal peptidase II [EC:3.4.23.36] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase {ECO:0000313|EMBL:KKT01710.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_17.;"
anamox1_curated_scaffold_1326_22
Leptotrichia sp. oral taxon 215, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

18256..19173
DNA (918bp) protein (306aa)
ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 215 str. W9775.;"
pseudouridine synthase
anamox1_curated_scaffold_1326_23
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

19170..20420
DNA (1251bp) protein (417aa)
transmembrane_regions bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKR06304.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
anamox1_curated_scaffold_1326_24
WS6_GWF1_33_233, WS6, Bacteria

Not on your lists

20410..21237
DNA (828bp) protein (276aa)
hypothetical protein bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKP45997.1}; species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF1_33_233.;"
hypothetical protein
anamox1_curated_scaffold_1326_25
Leptotrichia sp. oral taxon 879, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

21253..21753
DNA (501bp) protein (167aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia sp. oral taxon 879 str. F0557.;"
Crossover junction endodeoxyribonuclease RuvC Tax=Leptotrichia sp. oral taxon 879 str. F0557 RepID=U2RFS3_9FUSO
crossover junction endodeoxyribonuclease ruvC
Displaying 26 items

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