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anamox1_curated_scaffold_3056

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3056_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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1..1266
DNA (1266bp) protein (422aa)
Bacterial Ig-like domain protein bin=GWB2_Ignavibacteria_35_12 species=Vibrio sinaloensis genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
carboxypeptidase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3056_2
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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1385..5554
DNA (4170bp) protein (1390aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
5'-nucleotidase
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_3056_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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5742..6260
DNA (519bp) protein (173aa)
Late competence protein bin=GWB2_Ignavibacteria_35_12 species=Clostridium acidurici genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
competence protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3056_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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6288..6881
DNA (594bp) protein (198aa)
peptide deformylase (EC:3.5.1.88); K01462 peptide deformylase [EC:3.5.1.88] bin=BACIGN_2 species=Marivirga tractuosa genus=Marivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
def; peptide deformylase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3056_5
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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6994..7980
DNA (987bp) protein (329aa)
NAD-dependent epimerase/dehydratase bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
nucleoside-diphosphate sugar epimerase
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AFH49397.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox1_curated_scaffold_3056_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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8040..9590
DNA (1551bp) protein (517aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] bin=BACIGN_2 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=BACIGN_2 organism_group=Unknown_CP
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:3.5.4.10)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3056_7
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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9608..10606
DNA (999bp) protein (333aa)
Putative catechol pathway protein bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
catechol pathway protein
Putative catechol pathway protein {ECO:0000313|EMBL:AFH49379.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox1_curated_scaffold_3056_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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10631..11509
DNA (879bp) protein (293aa)
cmr:Cycma_0969 mechanosensitive ion channel protein MscS bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
mscs mechanosensitive ion channel
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox1_curated_scaffold_3056_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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11672..12643
DNA (972bp) protein (324aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_3056_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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12647..13741
DNA (1095bp) protein (365aa)
ErfK/YbiS/YcfS/YnhG family protein bin=BACIGN_2 species=Gillisia marina genus=Gillisia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
ErfK/YbiS/YcfS/YnhG family protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3056_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13853..14680
DNA (828bp) protein (276aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3056_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(14698..15807)
DNA (1110bp) protein (370aa)
Family 2 glycosyl transferase bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
glycosyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying 12 items

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