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anamox1_curated_scaffold_1883

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1883_1
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2..1615)
DNA (1614bp) protein (538aa)
Genome sequencing data, contig C300 bin=GWF2_Bacteroidetes_41_31 species=Microcystis aeruginosa genus=Microcystis taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
N-6 DNA methylase
Tax=GWF2_Bacteroidetes_41_31_curated
anamox1_curated_scaffold_1883_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(1703..2530)
DNA (828bp) protein (276aa)
Undecaprenyl-diphosphatase bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
undecaprenol kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(2540..5101)
DNA (2562bp) protein (854aa)
Diguanylate cyclase bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
diguanylate cyclase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

5380..6552
DNA (1173bp) protein (391aa)
lipopolysaccharide biosynthesis protein bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
lipopolysaccharide biosynthesis protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_5
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

6619..7740
DNA (1122bp) protein (374aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase Tax=Mastigocladopsis repens RepID=UPI0002E3234F
UDP-galactopyranose mutase {ECO:0000313|EMBL:KIJ78331.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
anamox1_curated_scaffold_1883_6
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

7956..8651
DNA (696bp) protein (232aa)
Glycosyltransferase family 2 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
glycosyl transferase family protein
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_1883_7
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

8614..9918
DNA (1305bp) protein (435aa)
Putative O-antigen transporter Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FIB8_9AQUI
polysaccharide biosynthesis protein
Tax=RifOxyB12_full_OP3_50_7_curated
anamox1_curated_scaffold_1883_8
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9970..10332
DNA (363bp) protein (121aa)
hypothetical protein bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII50362.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
anamox1_curated_scaffold_1883_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10350..11126
DNA (777bp) protein (259aa)
enoyl-CoA hydratase/isomerase; K01692 enoyl-CoA hydratase [EC:4.2.1.17] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_1883_10
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

11167..11952
DNA (786bp) protein (262aa)
enoyl-CoA hydratase/isomerase; K15866 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAL53348.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
enoyl-CoA hydratase
anamox1_curated_scaffold_1883_11
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12059..14290
DNA (2232bp) protein (744aa)
Outer membrane protein Tax=Microscilla marina ATCC 23134 RepID=A1ZPQ4_9BACT
Outer membrane protein {ECO:0000313|EMBL:EAY27559.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
yiaD; outer membrane protein
anamox1_curated_scaffold_1883_12
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14429..15013
DNA (585bp) protein (195aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002E805CB
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFD06616.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_1883_13
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15028..15489
DNA (462bp) protein (154aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002EC06A2
Uncharacterized protein {ECO:0000313|EMBL:EKF54057.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
anamox1_curated_scaffold_1883_14
Flavobacterium johnsoniae, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15498..16064
DNA (567bp) protein (189aa)
cytochrome B561 Tax=Flavobacterium antarcticum RepID=UPI0003B30C18
cytochrome B561
Cytochrome B561 {ECO:0000313|EMBL:ABQ07471.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101); (Cytophaga johnsonae).;"
anamox1_curated_scaffold_1883_15
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16151..17485
DNA (1335bp) protein (445aa)
Outer membrane efflux protein Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFH0_FLUTR
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AEA45684.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox1_curated_scaffold_1883_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

17524..18582
DNA (1059bp) protein (353aa)
Efflux transporter, RND family, MFP subunit Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFG9_FLUTR
RND family efflux transporter MFP subunit
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1883_17
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18595..21714
DNA (3120bp) protein (1040aa)
Acriflavin resistance protein Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IFG8_FLUTR
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:AEA45682.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
anamox1_curated_scaffold_1883_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

22102..23811
DNA (1710bp) protein (570aa)
dnaX; DNA polymerase III subunit gamma/tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
DNA polymerase III subunit tau
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_19
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23920..25239
DNA (1320bp) protein (440aa)
Putative uncharacterized protein Tax=Myroides odoratimimus CCUG 12901 RepID=H1GV77_9FLAO
transposase, IS4 family
Transposase, IS4 family {ECO:0000313|EMBL:AEW21585.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338); (Bacteroides forsythus).;"
anamox1_curated_scaffold_1883_20
unknown

Not on your lists

25232..25378
DNA (147bp) protein (49aa)

This feature has no annotations

anamox1_curated_scaffold_1883_21
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(25606..25872)
DNA (267bp) protein (89aa)
hypothetical protein bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACF13236.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;" source="Chloroherpeton thalassium (strain ATCC 35110 / GB-78).;"
anamox1_curated_scaffold_1883_22
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(25929..26879)
DNA (951bp) protein (317aa)
rfbD; dTDP-4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
rfbD; dTDP-4-dehydrorhamnose reductase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(26854..27573)
DNA (720bp) protein (240aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1883_24
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(27630..30521)
DNA (2892bp) protein (964aa)
hypothetical protein bin=BACIGN_2 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_25
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(30790..31191)
DNA (402bp) protein (134aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_26
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(31302..31997)
DNA (696bp) protein (232aa)
phage shock protein A-like transcriptional regulator; K03969 phage shock protein A bin=BACIGN_2 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Phage shock protein A (IM30), suppresses sigma54-dependent transcription
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_27
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

32269..32865
DNA (597bp) protein (199aa)
Recombination protein RecR bin=GWB2_Ignavibacteria_35_12 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
recombination protein RecR
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

32899..33534
DNA (636bp) protein (212aa)
id=7718826 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1883_29
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(33588..34100)
DNA (513bp) protein (171aa)
hypothetical protein bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1883_30
Pyrococcus sp. ST04, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(34088..34474)
DNA (387bp) protein (129aa)
Putative translation initiation inhibitor Tax=Pyrococcus sp. ST04 RepID=I3RDQ3_9EURY
translation initiation inhibitor
Putative translation initiation inhibitor {ECO:0000313|EMBL:AFK22363.1}; species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. ST04.;"
Displaying items 1-30 of 44 in total

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