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anamox1_curated_scaffold_2039

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2039_1
Desulfonatronum thiodismutans, Desulfonatronum, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..197)
DNA (195bp) protein (65aa)
ade; adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfonatronumaceae; Desulfonatronum.;" source="Desulfonatronum thiodismutans.;"
ade; adenine deaminase
anamox1_curated_scaffold_2039_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(197..1531)
DNA (1335bp) protein (445aa)
sodium:dicarboxylate symporter bin=BACIGN_2 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
sodium:dicarboxylate symporter
Sodium:dicarboxylate symporter {ECO:0000313|EMBL:ABJ82111.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
anamox1_curated_scaffold_2039_3
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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1774..2211
DNA (438bp) protein (146aa)
Acetyltransferases Tax=Chthonomonas calidirosea T49 RepID=S0EYT2_9BACT
Acetyltransferases
Tax=CG_Ignavi_01
anamox1_curated_scaffold_2039_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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2375..4429
DNA (2055bp) protein (685aa)
surA; Parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
surA; Parvulin-like peptidyl-prolyl isomerase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2039_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4426..5736
DNA (1311bp) protein (437aa)
surA; Parvulin-like peptidyl-prolyl isomerase; K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
surA; Parvulin-like peptidyl-prolyl isomerase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2039_6
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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5755..6828
DNA (1074bp) protein (358aa)
Heat-inducible transcription repressor hrcA bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hrcA; Heat-inducible transcriptional repressor
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2039_7
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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comp(6959..8572)
DNA (1614bp) protein (538aa)
Periplasmic protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
periplasmic protease
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_2039_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(8736..10154)
DNA (1419bp) protein (473aa)
Deoxyribonuclease, TatD Mg-dependent bin=GWA2_Ignavibacteria-rel_35_8 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hydrolase TatD
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2039_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(10186..10641)
DNA (456bp) protein (152aa)
ATPase; K06925 UPF0079 ATP-binding protein bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2039_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(10777..12336)
DNA (1560bp) protein (520aa)
Response regulator bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
response regulator receiver protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2039_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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12682..13212
DNA (531bp) protein (177aa)
hypothetical protein; K09748 ribosome maturation factor RimP bin=BACIGN_2 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
anamox1_curated_scaffold_2039_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13285..14595
DNA (1311bp) protein (437aa)
Transcription elongation factor; K02600 N utilization substance protein A bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
transcription elongation factor NusA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2039_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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14658..15158
DNA (501bp) protein (167aa)
Translation initiation factor IF-2 bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
translation initiation factor 2 (bIF-2)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying 13 items

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