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anamox1_curated_scaffold_2934

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2934_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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1..1734
DNA (1734bp) protein (578aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2934_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(1835..2179)
DNA (345bp) protein (115aa)
id=3571218 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2934_trna_1
unknown

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2589..2672
DNA (84bp)
transferRNA Tyr
anamox1_curated_scaffold_2934_trna_2
unknown

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2686..2758
DNA (73bp)
transferRNA Gly
anamox1_curated_scaffold_2934_trna_3
unknown

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2818..2890
DNA (73bp)
transferRNA Gly
anamox1_curated_scaffold_2934_trna_4
unknown

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2930..3002
DNA (73bp)
transferRNA Thr
anamox1_curated_scaffold_2934_trna_5
unknown

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3013..3085
DNA (73bp)
transferRNA Trp
anamox1_curated_scaffold_2934_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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3135..3317
DNA (183bp) protein (61aa)
secE; Preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
preprotein translocase subunit SecE
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2934_4
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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3364..3921
DNA (558bp) protein (186aa)
NusG antitermination factor; K02601 transcriptional antiterminator NusG bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
NusG antitermination factor
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2934_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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3991..4416
DNA (426bp) protein (142aa)
50S ribosomal protein L11 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
rplK; 50S ribosomal protein L11
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2934_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4529..5236
DNA (708bp) protein (236aa)
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 bin=BACIGN_2 species=unknown genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
rplA; 50S ribosomal protein L1
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2934_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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5364..5897
DNA (534bp) protein (178aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
rplJ; 50S ribosomal protein L10
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2934_8
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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5974..6354
DNA (381bp) protein (127aa)
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2934_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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6696..10520
DNA (3825bp) protein (1275aa)
rpoB; DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
rpoB; DNA-directed RNA polymerase subunit beta
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2934_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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11079..11213
DNA (135bp) protein (45aa)
rpoC; DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
DNA-directed RNA polymerase, beta' subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying 15 items

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