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anamox1_curated_scaffold_3213

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3213_1
unknown

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2..172
DNA (171bp) protein (57aa)

This feature has no annotations

anamox1_curated_scaffold_3213_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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comp(194..1366)
DNA (1173bp) protein (391aa)
16S rRNA (Cytosine(967)-C(5))-methyltransferase Tax=Indibacter alkaliphilus LW1 RepID=S2DG97_9BACT
sun protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_3213_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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1393..2286
DNA (894bp) protein (298aa)
tRNA pseudouridine synthase A bin=GWB2_Ignavibacteria_35_12 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
tRNA pseudouridine synthase A
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3213_4
GWD2_Desulfuromonadales_54_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2256..2675)
DNA (420bp) protein (140aa)
Putative uncharacterized protein bin=GWB2_Pelobacter_53_15 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWD2_Desulfuromonadales_54_10_curated
anamox1_curated_scaffold_3213_5
unknown

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comp(2830..3180)
DNA (351bp) protein (117aa)
hypothetical protein Tax=Lewinella persica RepID=UPI00036A2860
anamox1_curated_scaffold_3213_6
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3421..4062)
DNA (642bp) protein (214aa)
LexA repressor {ECO:0000255|HAMAP-Rule:MF_00015}; EC=3.4.21.88 {ECO:0000255|HAMAP-Rule:MF_00015};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
LexA repressor Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=LEXA_DESAA
SOS-response transcriptional repressor, LexA
anamox1_curated_scaffold_3213_7
BJP_IG2069_Spirochaetales_48_31, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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comp(4156..5718)
DNA (1563bp) protein (521aa)
id=7718997 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Tax=BJP_IG2069_Spirochaetales_48_31
anamox1_curated_scaffold_3213_8
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

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5987..6988
DNA (1002bp) protein (334aa)
Phage integrase family site specific recombinase Tax=uncultured Bacteroidetes bacterium RepID=H5SIM4_9BACT
Phage integrase family site specific recombinase {ECO:0000313|EMBL:BAL56010.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
integrase family protein
anamox1_curated_scaffold_3213_9
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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7124..7819
DNA (696bp) protein (232aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase bin=GWC2_Ignavibacteria_56_12 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_3213_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7776..8039
DNA (264bp) protein (88aa)
3-hydroxyacyl-CoA dehydrogenase nad-binding protein; K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] bin=BACIGN_2 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
paaH; 3-hydroxybutyryl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KGF79450.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
anamox1_curated_scaffold_3213_11
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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8040..9683
DNA (1644bp) protein (548aa)
Peptidoglycan-associated outer membrane protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
peptidoglycan-associated outer membrane protein
Tax=RBG_16_Ignavibacteria_35_7_curated
anamox1_curated_scaffold_3213_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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9798..10439
DNA (642bp) protein (214aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Daphnia pulex genus=Daphnia taxon_order=Diplostraca taxon_class=Branchiopoda phylum=Arthropoda tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3213_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10432..11322
DNA (891bp) protein (297aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase bin=GWB2_Ignavibacteria_35_12 species=unknown genus=Psychroflexus taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3213_14
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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11330..14467
DNA (3138bp) protein (1046aa)
hypothetical protein bin=BACIGN_2 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_3213_15
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

14517..17573
DNA (3057bp) protein (1019aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_3213_16
Clostridium sp. BNL1100, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17674..21129)
DNA (3456bp) protein (1152aa)
BNR/Asp-box repeat protein Tax=Clostridium sp. BNL1100 RepID=H2J8J2_9CLOT
BNR/Asp-box repeat-containing protein
BNR/Asp-box repeat protein {ECO:0000313|EMBL:AEY67460.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BNL1100.;"
anamox1_curated_scaffold_3213_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(21228..21830)
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA bin=GWA2_Ignavibacteria-rel_35_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Holliday junction DNA helicase RuvA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3213_18
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(21916..22803)
DNA (888bp) protein (296aa)
Acyl-CoA dehydrogenase bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AFN73663.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source="Melioribacter roseus (strain JCM 17771 / P3M-2).;"
Displaying 18 items

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