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anamox1_curated_scaffold_1888

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1888_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(2..724)
DNA (723bp) protein (241aa)
hypothetical protein bin=BACIGN_2 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1888_2
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(773..2341)
DNA (1569bp) protein (523aa)
hypothetical protein bin=BACIGN_2 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1888_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(2458..3141)
DNA (684bp) protein (228aa)
phosphatidate cytidylyltransferase bin=BACIGN_2 species=Pelodictyon phaeoclathratiforme genus=Pelodictyon taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
dolichol kinase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1888_4
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3172..4032
DNA (861bp) protein (287aa)
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=GWA2_Ignavibacteria_54_16_curated
anamox1_curated_scaffold_1888_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

4048..5538
DNA (1491bp) protein (497aa)
Glycogen synthase 1 bin=GWA2_Ignavibacteria-rel_35_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
glycogen synthase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1888_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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5557..5859
DNA (303bp) protein (101aa)
ATP-dependent Clp protease adaptor protein ClpS bin=GWC2_Ignavibacteria_56_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
ATP-dependent Clp protease adaptor protein ClpS
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_1888_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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5958..7007
DNA (1050bp) protein (350aa)
asd; aspartate-semialdehyde dehydrogenase; K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] bin=BACIGN_2 species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=BACIGN_2 organism_group=Unknown_CP
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1888_8
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

7037..8392
DNA (1356bp) protein (452aa)
Na+/H+ antiporter NhaA; K03313 Na+:H+ antiporter, NhaA family bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Na+/H+ antiporter NhaA
Tax=RBG_16_Ignavibacteria_34_14_curated
anamox1_curated_scaffold_1888_9
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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8409..8954
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6P2V0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU51824.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
anamox1_curated_scaffold_1888_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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8989..10098
DNA (1110bp) protein (370aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase (GDP); mannose-6-phosphate isomerase, type 2 bin=GWA2_Ignavibacteria-rel_35_8 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1888_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10124..11236
DNA (1113bp) protein (371aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase bin=GWA2_Ignavibacteria-rel_35_8 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1888_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


11266..13959
DNA (2694bp) protein (898aa)
valS; valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
valS; valyl-tRNA synthetase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1888_13
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

13976..15184
DNA (1209bp) protein (403aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9 2.3.1.174) bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
acetyl-CoA acetyltransferase (EC:2.3.1.174 2.3.1.9)
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:BAL53587.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
anamox1_curated_scaffold_1888_14
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

15328..15852
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENF8_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50203.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
Displaying 14 items

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