ggKbase home page

anamox1_curated_scaffold_1575

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1575_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(3..1502)
DNA (1500bp) protein (500aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] bin=BACIGN_2 species=unknown genus=Chlorobaculum taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1575_2
unknown

Not on your lists

1596..1820
DNA (225bp) protein (75aa)

This feature has no annotations

anamox1_curated_scaffold_1575_3
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1912..3153
DNA (1242bp) protein (414aa)
Putative two-component hybrid sensor and regulator, histidine kinase Tax=Arthrospira sp. PCC 8005 RepID=H1W9Z9_9CYAN
Chemotaxis protein CheY {ECO:0000313|EMBL:KKD37824.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
two-component hybrid sensor and regulator
anamox1_curated_scaffold_1575_4
Campylobacter hyointestinalis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

3150..3629
DNA (480bp) protein (160aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12); K01770 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] bin=BACIGN_2 species=Novosphingobium nitrogenifigens genus=Novosphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
Bifunctional enzyme IspD/IspF {ECO:0000256|HAMAP-Rule:MF_01520, ECO:0000256|SAAS:SAAS00096235}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobacter hyointestinalis subsp. hyointestinalis.;"
anamox1_curated_scaffold_1575_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

3632..5920
DNA (2289bp) protein (763aa)
Sensory transduction histidine kinase bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1575_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

5892..6365
DNA (474bp) protein (158aa)
putative Holliday junction resolvase (EC:3.1.-.-); K07447 putative holliday junction resolvase [EC:3.1.-.-] bin=BACIGN_2 species=Myroides odoratimimus genus=Myroides taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
RNAse H-fold protein YqgF (EC:3.1.-.-)
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1575_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

6362..7699
DNA (1338bp) protein (446aa)
hypothetical protein bin=BACIGN_2 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1575_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7986..8222)
DNA (237bp) protein (79aa)
hypothetical protein bin=BACIGN_2 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1575_9
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8286..9287)
DNA (1002bp) protein (334aa)
NADPH:quinone reductase {ECO:0000313|EMBL:AEE48016.1}; EC=1.6.5.5 {ECO:0000313|EMBL:AEE48016.1};; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
NADPH:quinone reductase Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KSQ2_HALH1
NADPH:quinone reductase
anamox1_curated_scaffold_1575_10
Microscilla marina, Microscilla, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

9473..10066
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Microscilla marina ATCC 23134 RepID=A1ZC73_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EAY31875.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Microscilla.;" source="Microscilla marina ATCC 23134.;"
anamox1_curated_scaffold_1575_11
GWC2_ACD39_50_8_curated, ACD39, Bacteria

Not on your lists

comp(10055..11947)
DNA (1893bp) protein (631aa)
arginine decarboxylase (EC:4.1.1.19); K01585 arginine decarboxylase [EC:4.1.1.19] bin=BACIGN_2 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
putative arginine decarboxylase
Tax=GWC2_ACD39_50_8_curated
anamox1_curated_scaffold_1575_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(12180..12533)
DNA (354bp) protein (118aa)
30S ribosomal protein S18 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S18
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1575_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


comp(12530..12769)
DNA (240bp) protein (80aa)
rpmE2; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 bin=BACIGN_2 species=Granulibacter bethesdensis genus=Granulibacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
rpmE; 50S ribosomal protein L31
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1575_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(12782..12955)
DNA (174bp) protein (58aa)
id=7717725 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1575_15
RBG_16_Chloroflexi_51_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(13082..14092)
DNA (1011bp) protein (337aa)
6-phosphofructokinase Tax=Chloroflexi bacterium oral taxon 439 RepID=UPI0003B5C889
pfkA2; 6-Phosphofructokinase
Tax=RBG_16_Chloroflexi_51_16_curated
anamox1_curated_scaffold_1575_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(14148..15410)
DNA (1263bp) protein (421aa)
murA; UDP-N-acetylglucosamine enolpyruvyl transferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1575_17
RBG_16_Caldithrix_48_16_curated, Caldithrix, Bacteria

Not on your lists

comp(15613..18429)
DNA (2817bp) protein (939aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_33_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
hypothetical protein
Tax=RBG_16_Caldithrix_48_16_curated
anamox1_curated_scaffold_1575_18
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18517..18660
DNA (144bp) protein (48aa)
Transposase Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YSU3_CAPCC
transposase
Transposase {ECO:0000313|EMBL:CEN51382.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
Displaying 18 items

View Taxonomy