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anamox1_curated_scaffold_789

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_789_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1..858
DNA (858bp) protein (286aa)
clpX; ATP-dependent protease Clp ATPase subunit; K03544 ATP-dependent Clp protease ATP-binding subunit ClpX bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
clpX; ATP-dependent protease Clp ATPase subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1092..2972
DNA (1881bp) protein (627aa)
OmpA/MotB domain-containing protein bin=GWA2_Ignavibacteria-rel_35_8 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
pal; putative peptidoglycan-associated lipoprotein Pal
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_3
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3056..3748
DNA (693bp) protein (231aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000256|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UCG0_MYXSD
ubiquinone/menaquinone biosynthesis methyltransferase
anamox1_curated_scaffold_789_4
GWB1_Spirochaetes_36_13_curated, Spirochaetes, Bacteria

Not on your lists

3840..4940
DNA (1101bp) protein (367aa)
Uncharacterized protein bin=GWB1_CP_36_13 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB1_CP_36_13 organism_group=Unknown_CP organism_desc=sibling to Aquificae (deep branch) based on rpS3
double zinc ribbon family protein
Tax=GWB1_Spirochaetes_36_13_curated
anamox1_curated_scaffold_789_5
Flexibacter litoralis, Flexibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5030..5365
DNA (336bp) protein (112aa)
Transposase Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AK33_FLELS
transposase
Transposase {ECO:0000313|EMBL:AFM04318.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Flexibacter.;" source="Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 /; NCIMB 1366 / Sio-4).;"
anamox1_curated_scaffold_789_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(5759..7480)
DNA (1722bp) protein (574aa)
DNA repair protein RecN bin=GWC2_Ignavibacteria_56_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
recN; DNA repair protein RecN
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_789_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7984..10716)
DNA (2733bp) protein (911aa)
hypothetical protein Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B57306
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:AHG91067.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
anamox1_curated_scaffold_789_8
R_OD1_41_19, Parcubacteria, Bacteria

Not on your lists

11035..11880
DNA (846bp) protein (282aa)
Beta-lactamase domain protein bin=GWC1_Spirochaetes_27_15 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
hypothetical protein
Tax=RIFCSPHIGHO2_02_OD1_41_19_curated
anamox1_curated_scaffold_789_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

12045..12818
DNA (774bp) protein (258aa)
Chemotaxis protein MotB bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
flagellar motor protein MotD
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_10
Marinitoga piezophila, Marinitoga, Petrotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

12858..13703
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3) RepID=H2J5V3_MARPK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEX86172.1}; species="Bacteria; Thermotogae; Petrotogales; Petrotogaceae; Marinitoga.;" source="Marinitoga piezophila (strain DSM 14283 / JCM 11233 / KA3).;"
anamox1_curated_scaffold_789_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

13734..13976
DNA (243bp) protein (81aa)
Carbon storage regulator homolog bin=GWA2_Ignavibacteria-rel_35_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
carbon storage regulator CsrA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

13976..14608
DNA (633bp) protein (211aa)
Response regulator receiver protein bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
response regulator receiver protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_789_13
GWA2_Ignavibacteria_54_16_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(14640..16376)
DNA (1737bp) protein (579aa)
Serine--glyoxylate transaminase bin=GWC2_Ignavibacteria_56_12 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
class V aminotransferase
Tax=GWA2_Ignavibacteria_54_16_curated
anamox1_curated_scaffold_789_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

17115..17672
DNA (558bp) protein (186aa)
ATP/cobalamin adenosyltransferase bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
ATP/cobalamin adenosyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_789_15
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

17730..18470
DNA (741bp) protein (247aa)
DNA repair protein RecO bin=GWA2_Ignavibacteria-rel_35_8 species=Peptostreptococcus stomatis genus=Peptostreptococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
recO; DNA repair protein recO
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_16
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

18501..19802
DNA (1302bp) protein (434aa)
hypothetical protein bin=BACIGN_2 species=Pontibacter sp. BAB1700 genus=Pontibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
hemolysins-related protein containing CBS domains
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(20068..22194)
DNA (2127bp) protein (709aa)
Fe-S oxidoreductase bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
Fe-S oxidoreductase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_789_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


22448..23704
DNA (1257bp) protein (419aa)
Histidine--tRNA ligase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] bin=BACIGN_2 species=unknown genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_789_19
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

23906..27604
DNA (3699bp) protein (1233aa)
PDK repeat-containing protein
Putative uncharacterized protein bin=GWF2_Bacteroidetes_38_335 species=Leadbetterella byssophila genus=Leadbetterella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
anamox1_curated_scaffold_789_20
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27833..28384
DNA (552bp) protein (184aa)
hypothetical protein Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000366E287
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48668.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_789_21
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28474..29043
DNA (570bp) protein (190aa)
Uncharacterized protein Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0MAR4_9SPHI
putative Crp/Fnr family transcriptional regulator
Putative Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:BAP31182.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
anamox1_curated_scaffold_789_22
Elizabethkingia miricola, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29121..30200
DNA (1080bp) protein (360aa)
Uncharacterized protein Tax=Elizabethkingia RepID=L8K418_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGO10194.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia miricola (Chryseobacterium miricola).;"
membrane protein
anamox1_curated_scaffold_789_23
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

30535..31716
DNA (1182bp) protein (394aa)
BNR/Asp-box repeat protein bin=GWB2_Ignavibacteria_35_12 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
BNR/Asp-box repeat-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_789_24
unknown

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31719..31913
DNA (195bp) protein (65aa)

This feature has no annotations

anamox1_curated_scaffold_789_25
unknown

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31910..32017
DNA (108bp) protein (36aa)

This feature has no annotations

Displaying 25 items

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