ggKbase home page

anamox1_curated_scaffold_3000

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3000_1
unknown

Not on your lists

67..648
DNA (582bp) protein (194aa)
putative Xre family DNA-binding protein
anamox1_curated_scaffold_3000_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

664..1182
DNA (519bp) protein (173aa)
Ribosome maturation factor RimM bin=GWB2_Ignavibacteria_35_12 species=Peptoniphilus sp. oral taxon 386 genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
16S rRNA-processing protein RimM
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3000_3
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

1441..2640
DNA (1200bp) protein (400aa)
bioF; 8-amino-7-oxononanoate synthase bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
8-amino-7-oxononanoate synthase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_3000_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

2828..3733
DNA (906bp) protein (302aa)
Chemotaxis protein methyltransferase CheR bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
cheR; Chemotaxis protein methyltransferase CheR
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3000_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3807..4184
DNA (378bp) protein (126aa)
Response regulator receiver protein Tax=Rhodothermus marinus RepID=D0MGB7_RHOM4
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AEN74009.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
anamox1_curated_scaffold_3000_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4226..5161
DNA (936bp) protein (312aa)
Putative chemotaxis phosphatase, CheZ Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFJ5_RHOMR
putative chemotaxis phosphatase, CheZ
Putative chemotaxis phosphatase, CheZ {ECO:0000313|EMBL:AEN74010.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
anamox1_curated_scaffold_3000_7
Helicobacter sanguini, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

5220..7250
DNA (2031bp) protein (677aa)
histidine kinase (EC:2.7.13.3)
Two-component system, chemotaxis family, sensor kinase CheA Tax=Helicobacter bilis WiWa RepID=N2BL59_9HELI
Chemotaxis protein CheA {ECO:0000313|EMBL:KGI52939.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter sanguini.;"
anamox1_curated_scaffold_3000_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7378..8487
DNA (1110bp) protein (370aa)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Chemotaxis response regulator protein-glutamate methylesterase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGB4_RHOM4
response regulator receiver modulated CheB methylesterase
anamox1_curated_scaffold_3000_9
unknown

Not on your lists

8511..8873
DNA (363bp) protein (121aa)

This feature has no annotations

anamox1_curated_scaffold_3000_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8863..9186)
DNA (324bp) protein (108aa)
hypothetical protein bin=BACIGN_2 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3000_11
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9186..10988)
DNA (1803bp) protein (601aa)
acetate--CoA ligase (EC:6.2.1.1)
Acetate--CoA ligase {ECO:0000313|EMBL:AFZ12215.1}; EC=6.2.1.1 {ECO:0000313|EMBL:AFZ12215.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A2CAE
Displaying 11 items

View Taxonomy