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anamox1_curated_scaffold_3258

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_3258_trna_1
unknown

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79..152
DNA (74bp)
transferRNA Met
anamox1_curated_scaffold_3258_trna_2
unknown

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177..248
DNA (72bp)
transferRNA Lys
anamox1_curated_scaffold_3258_1
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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450..2468
DNA (2019bp) protein (673aa)
methylmalonyl-CoA mutase; K11942 methylmalonyl-CoA mutase [EC:5.4.99.2] bin=BACIGN_2 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
methylmalonyl-CoA mutase, N-terminal domain/subunit
Methylmalonyl-CoA mutase, N-terminal domain/subunit {ECO:0000313|EMBL:AFD08918.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
anamox1_curated_scaffold_3258_2
unknown

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comp(2512..3366)
DNA (855bp) protein (285aa)

This feature has no annotations

anamox1_curated_scaffold_3258_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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3411..4304
DNA (894bp) protein (298aa)
Uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3258_4
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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4380..5135
DNA (756bp) protein (252aa)
hypothetical protein Tax=Fischerella thermalis RepID=UPI0002EA381F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64658.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
anamox1_curated_scaffold_3258_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(5152..5790)
DNA (639bp) protein (213aa)
carbonic anhydrase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1] bin=BACIGN_2 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=BACIGN_2 organism_group=Unknown_CP
carbonic anhydrase (EC:4.2.1.1)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
anamox1_curated_scaffold_3258_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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5893..6534
DNA (642bp) protein (214aa)
RNA polymerase, sigma-24 subunit, ECF subfamily bin=GWA2_Ignavibacteria-rel_35_8 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3258_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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6527..7159
DNA (633bp) protein (211aa)
id=7717990 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_3258_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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7143..7631
DNA (489bp) protein (163aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_3258_9
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(7702..8286)
DNA (585bp) protein (195aa)
DNA-3-methyladenine glycosylase I (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I bin=GWF2_Bacteroidetes_33_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Tax=GWE2_Bacteroidetes_32_14_curated
anamox1_curated_scaffold_3258_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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8505..9056
DNA (552bp) protein (184aa)
id=7717808 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_3258_11
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9303..9980
DNA (678bp) protein (226aa)
short-chain dehydrogenase/reductase SDR bin=BACIGN_2 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:ESQ14340.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
short-chain dehydrogenase/reductase SDR
Displaying 13 items

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