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anamox1_curated_scaffold_2654

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2654_1
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

2..1243
DNA (1242bp) protein (414aa)
hypothetical protein bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_2654_2
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1257..1691
DNA (435bp) protein (145aa)
anti-sigma regulatory factor bin=BACIGN_2 species=Flexibacter litoralis genus=Flexibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
anti-sigma regulatory factor
Anti-sigma regulatory factor {ECO:0000313|EMBL:AFC24881.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis (strain Lewin).;"
anamox1_curated_scaffold_2654_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1895..2332
DNA (438bp) protein (146aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2654_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

2380..2802
DNA (423bp) protein (141aa)
Probable rRNA maturation factor bin=GWB2_Ignavibacteria_35_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
metalloprotease ybeY
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2654_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

2815..3273
DNA (459bp) protein (153aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
smg; hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2654_trna_1
unknown

Not on your lists

3335..3408
DNA (74bp)
transferRNA Arg
anamox1_curated_scaffold_2654_6
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

3548..3772
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Ruminococcus sp. CAG:563 RepID=R6EHQ6_9FIRM
FeoA family protein
FeoA family protein {ECO:0000313|EMBL:AKC83672.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
anamox1_curated_scaffold_2654_7
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

3792..5645
DNA (1854bp) protein (618aa)
ferrous iron transport protein B; K04759 ferrous iron transport protein B bin=BACIGN_2 species=Mobilicoccus pelagius genus=Mobilicoccus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
ferrous iron transport protein b
Tax=RBG_13_Actinobacteria_63_9_curated
anamox1_curated_scaffold_2654_8
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(5709..7736)
DNA (2028bp) protein (676aa)
Uncharacterized protein Tax=Fusobacterium nucleatum RepID=V6WEV2_FUSNU
Uncharacterized protein {ECO:0000313|EMBL:KIJ78589.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
hypothetical protein
anamox1_curated_scaffold_2654_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7859..8389)
DNA (531bp) protein (177aa)
hypothetical protein; K03571 rod shape-determining protein MreD bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2654_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(8407..9270)
DNA (864bp) protein (288aa)
mreC; Rod shape-determining protein MreC; K03570 rod shape-determining protein MreC bin=BACIGN_2 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
mreC; rod shape-determining protein MreC
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2654_11
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(9277..9954)
DNA (678bp) protein (226aa)
segregation and condensation protein B; K06024 segregation and condensation protein B bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
scpB; segregation and condensation protein B
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2654_12
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9938..11038)
DNA (1101bp) protein (367aa)
binding-protein-dependent transport system inner membrane protein; K13894 microcin C transport system permease protein bin=BACIGN_2 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
binding-protein-dependent transport system inner membrane protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
anamox1_curated_scaffold_2654_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(11056..11436)
DNA (381bp) protein (127aa)
UPF0102 protein Despr_2383 bin=GWB2_Ignavibacteria_35_12 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
endonuclease
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2654_14
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11640..12380
DNA (741bp) protein (247aa)
hypothetical protein bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
esterase
Esterase {ECO:0000313|EMBL:AEE51981.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_2654_15
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12483..13151)
DNA (669bp) protein (223aa)
id=4834065 bin=GWC2_Ignavibacteria_38_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
anamox1_curated_scaffold_2654_16
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13358..13645)
DNA (288bp) protein (96aa)
transposase, IS204/IS1001/IS1096/IS1165 Tax=Verrucomicrobium spinosum RepID=UPI0001746896
Uncharacterized protein {ECO:0000313|EMBL:CEN52126.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga canimorsus.;"
hypothetical protein
Displaying 17 items

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