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anamox1_curated_scaffold_962

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_962_1
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

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1..3654
DNA (3654bp) protein (1218aa)
Heavy metal efflux pump, CzcA family Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EVM3_EMTOG
heavy metal efflux pump, CzcA family
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_962_2
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

3666..4796
DNA (1131bp) protein (377aa)
Probable membrane fusion efflux lipoprotein Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GY08_FLAPJ
hemolysin D
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
anamox1_curated_scaffold_962_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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4984..5949
DNA (966bp) protein (322aa)
pyrB; aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase bin=GWA2_Ignavibacteria-rel_35_8 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_962_trna_1
unknown

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comp(6006..6080)
DNA (75bp)
transferRNA Val
anamox1_curated_scaffold_962_4
unknown

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comp(6221..6928)
DNA (708bp) protein (236aa)

This feature has no annotations

anamox1_curated_scaffold_962_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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7123..8145
DNA (1023bp) protein (341aa)
mreB; Rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
mreB; rod shape-determining protein MreB
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_962_6
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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8347..8925
DNA (579bp) protein (193aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
signal peptidase I (EC:3.4.21.89)
Signal peptidase I bin=GWF2_Melioribacter_38_21 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
anamox1_curated_scaffold_962_7
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8950..10062)
DNA (1113bp) protein (371aa)
Glutamine--scyllo-inositol transaminase Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2MPK8_9PROT
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Glutamine--scyllo-inositol aminotransferase {ECO:0000313|EMBL:KEO57896.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
anamox1_curated_scaffold_962_8
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(10213..12672)
DNA (2460bp) protein (820aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QYP5_CHLT3
Uncharacterized protein {ECO:0000313|EMBL:KER10871.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
ATPase
anamox1_curated_scaffold_962_9
CSP1_5_NC10, NC10, Bacteria

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comp(12697..15498)
DNA (2802bp) protein (934aa)
FAD linked oxidase-like bin=bin3_NC10 species=Holophaga foetida genus=Holophaga taxon_order=Holophagales taxon_class=Holophagae phylum=Acidobacteria tax=bin3_NC10 organism_group=NC10
FAD linked oxidase-like protein
Tax=CSP1_5_NC10
anamox1_curated_scaffold_962_10
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(15488..16024)
DNA (537bp) protein (179aa)
pyrE; orotate phosphoribosyltransferase; K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] bin=BACIGN_2 species=Clostridium sp. DL-VIII genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=BACIGN_2 organism_group=Unknown_CP
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
anamox1_curated_scaffold_962_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(16074..16703)
DNA (630bp) protein (210aa)
Regulatory protein RecX bin=GWA2_Ignavibacteria-rel_35_8 species=Clostridium saccharoperbutylacetonicum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
recX; regulatory protein RecX
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_962_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(16716..17930)
DNA (1215bp) protein (405aa)
tyrS; tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
tyrS; tyrosyl-tRNA synthetase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_962_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18090..20258)
DNA (2169bp) protein (723aa)
Uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_962_14
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(20347..21078)
DNA (732bp) protein (244aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox1_curated_scaffold_962_15
unknown

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21746..22909
DNA (1164bp) protein (388aa)

This feature has no annotations

anamox1_curated_scaffold_962_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

22932..23852
DNA (921bp) protein (307aa)
Leucine rich repeat protein bin=GWF2_Ignavibacteria_33_9 species=Leptospira interrogans genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Leucine Rich Repeat (LRR)-containing protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_962_17
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23849..24268)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L849_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO57895.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
anamox1_curated_scaffold_962_18
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24265..27234)
DNA (2970bp) protein (990aa)
Radical SAM domain protein Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3EBN0_GEOLS
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACD97069.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
Displaying 19 items

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