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anamox1_curated_scaffold_1727

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1727_1
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
PAS domain S-box Tax=Thauera sp. 63 RepID=N6YAR3_9RHOO
PAS domain S-box {ECO:0000313|EMBL:ENO79477.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
putative signal-transduction sensor protein
anamox1_curated_scaffold_1727_2
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(557..1447)
DNA (891bp) protein (297aa)
hypothetical protein Tax=Cytophaga aurantiaca RepID=UPI00037C8CE5
Uncharacterized protein {ECO:0000313|EMBL:CDA21915.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
anamox1_curated_scaffold_1727_3
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1749..2360
DNA (612bp) protein (204aa)
Methyltransferase type 11 Tax=Sphingobacterium sp. (strain 21) RepID=F4C5W1_SPHS2
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ADZ80126.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
anamox1_curated_scaffold_1727_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(2443..3210)
DNA (768bp) protein (256aa)
Outer membrane assembly lipoprotein YfiO bin=GWA2_Ignavibacteria-rel_35_8 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
DNA uptake lipoprotein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1727_5
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

comp(3437..4600)
DNA (1164bp) protein (388aa)
gcdH; glutaryl-CoA dehydrogenase; K00252 glutaryl-CoA dehydrogenase [EC:1.3.99.7] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
Glutaryl-CoA dehydrogenase {ECO:0000313|EMBL:BAL53327.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
gcdH; glutaryl-CoA dehydrogenase
anamox1_curated_scaffold_1727_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(4795..6003)
DNA (1209bp) protein (403aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1727_7
unknown

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comp(6039..7379)
DNA (1341bp) protein (447aa)
id=7717816 bin=BACIGN_2 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BACIGN_2 organism_group=Unknown_CP
anamox1_curated_scaffold_1727_8
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(7476..8774)
DNA (1299bp) protein (433aa)
fibronectin type III domain-containing protein bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox1_curated_scaffold_1727_9
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

8982..10070
DNA (1089bp) protein (363aa)
hypothetical protein; K03593 ATP-binding protein involved in chromosome partitioning bin=BACIGN_2 species=Fischerella sp. JSC-11 genus=Fischerella taxon_order=Stigonematales taxon_class=unknown phylum=Cyanobacteria tax=BACIGN_2 organism_group=Unknown_CP
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1727_10
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

10080..10328
DNA (249bp) protein (83aa)
Nitrogen-fixing NifU domain-containing protein bin=GWA2_Ignavibacteria-rel_35_8 species=Caldalkalibacillus thermarum genus=Caldalkalibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
nitrogen-fixing NifU domain-containing protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1727_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

10413..13037
DNA (2625bp) protein (875aa)
DNA mismatch repair protein MutS bin=GWA2_Ignavibacteria-rel_35_8 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
mutS; MutS family mismatch repair protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1727_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13041..14366)
DNA (1326bp) protein (442aa)
ATP-dependent Clp protease ATP-binding subunit bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
clpB; ATP-dependent Clp protease ATP-binding subunit
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1727_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

14576..15262
DNA (687bp) protein (229aa)
plsY; Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
plsY; glycerol-3-phosphate acyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1727_14
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15207..15470
DNA (264bp) protein (88aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Cytosine-specific methyltransferase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607Y5_METCA
C-5 cytosine-specific DNA methylase
anamox1_curated_scaffold_1727_15
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15571..15972
DNA (402bp) protein (134aa)
type II restriction endonuclease Tax=Pseudomonas thermotolerans RepID=UPI0003672814
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAU92380.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
anamox1_curated_scaffold_1727_16
Helicobacter macacae, Helicobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

15960..16271
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Helicobacter macacae MIT 99-5501 RepID=V8C8K4_9HELI
Uncharacterized protein {ECO:0000313|EMBL:ETD23407.1}; species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter.;" source="Helicobacter macacae MIT 99-5501.;"
hypothetical protein
anamox1_curated_scaffold_1727_17
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

16426..17055
DNA (630bp) protein (210aa)
hypothetical protein; K05995 dipeptidase E [EC:3.4.13.21] bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
hypothetical protein
Tax=AR5
Displaying 17 items

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