ggKbase home page

anamox1_curated_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_598_1
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1462
DNA (1461bp) protein (487aa)
hypothetical protein bin=BACIGN_2 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=BACIGN_2 organism_group=Unknown_CP
Ubiquitous surface protein A2H {ECO:0000313|EMBL:AGH27432.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrhalis.;"
hypothetical protein
anamox1_curated_scaffold_598_2
unknown

Not on your lists

1482..1859
DNA (378bp) protein (126aa)

This feature has no annotations

anamox1_curated_scaffold_598_3
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

1907..4276
DNA (2370bp) protein (790aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_4
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

4301..5578
DNA (1278bp) protein (426aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_5
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

5703..7211
DNA (1509bp) protein (503aa)
outer membrane protein A precursor bin=GWB2_Ignavibacteria_35_12 species=Vibrio rotiferianus genus=Vibrio taxon_order=Vibrionales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
OmpA/MotB domain-containing protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_598_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

7310..7702
DNA (393bp) protein (131aa)
Multi-sensor hybrid histidine kinase bin=GWB2_Ignavibacteria_35_12 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
response regulator receiver protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

7773..8672
DNA (900bp) protein (300aa)
Putative Sensor protein bin=GWB2_Ignavibacteria_35_12 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
signal transduction histidine kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

8648..9949
DNA (1302bp) protein (434aa)
Putative Sensor protein bin=GWB2_Ignavibacteria_35_12 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
signal transduction histidine kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10020..10235
DNA (216bp) protein (72aa)
TM2 domain containing protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TFQ6_9CHLR
TM2 domain containing protein {ECO:0000313|EMBL:EFH90539.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
TM2 domain protein
anamox1_curated_scaffold_598_10
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10309..10749
DNA (441bp) protein (147aa)
hypothetical protein Tax=Fischerella muscicola RepID=UPI00030FE4CA
membrane protein
Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
anamox1_curated_scaffold_598_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11116..16119
DNA (5004bp) protein (1668aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002E865F3
PAS domain S-box {ECO:0000313|EMBL:KCZ71710.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PAS domain-containing protein
anamox1_curated_scaffold_598_12
uncultured Bacteroidetes bacterium, Bacteroidetes, Bacteria

Not on your lists

comp(16193..16693)
DNA (501bp) protein (167aa)
4-hydroxybenzoyl-CoA thioesterase Tax=uncultured Bacteroidetes bacterium RepID=H5SBN2_9BACT
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:BAL53568.1}; species="Bacteria; Bacteroidetes; environmental samples.;" source="uncultured Bacteroidetes bacterium.;"
acyl-CoA thioesterase
anamox1_curated_scaffold_598_13
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

17070..19052
DNA (1983bp) protein (661aa)
gyrB; DNA gyrase subunit B; K02470 DNA gyrase subunit B [EC:5.99.1.3] bin=BACIGN_2 species=uncultured Bacteroidetes bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
DNA gyrase subunit B
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_14
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19073..19999)
DNA (927bp) protein (309aa)
peptidase bin=BACIGN_2 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
peptidase
Peptidase {ECO:0000313|EMBL:AEM70542.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1).;"
anamox1_curated_scaffold_598_15
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20116..21279)
DNA (1164bp) protein (388aa)
type II DNA modification methyltransferase (EC:2.1.1.72)
Putative type II DNA modification enzyme (Methyltransferase) bin=GWA2_Ignavibacteria-rel_35_8 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=GWA2_Bacteroidetes_30_7_curated
anamox1_curated_scaffold_598_16
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21285..22067)
DNA (783bp) protein (261aa)
Type II restriction enzyme bin=GWA2_Ignavibacteria-rel_35_8 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
type II restriction enzyme
Tax=GWA2_Bacteroidetes_30_7_curated
anamox1_curated_scaffold_598_17
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22268..22903)
DNA (636bp) protein (212aa)
Uncharacterized protein bin=GWE2_Bacteroidetes_40_63 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_63 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=GWE2_Bacteroidetes_40_63_curated
anamox1_curated_scaffold_598_18
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(22957..23829)
DNA (873bp) protein (291aa)
hypothetical protein bin=BACIGN_2 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_598_19
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24010..24537)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KZD9_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE48434.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_598_20
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(24590..25069)
DNA (480bp) protein (160aa)
alkyl hydroperoxide reductase Tax=Fodinicurvata sediminis RepID=UPI0003B52D1E
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
anamox1_curated_scaffold_598_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(25206..26120)
DNA (915bp) protein (305aa)
hypothetical protein bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_598_22
RIFOXYC12_FULL_TA06_54_24_curated, TA06, Bacteria

Not on your lists

26382..27875
DNA (1494bp) protein (498aa)
hypothetical protein
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RIFOXYC12_FULL_TA06_54_24_curated
anamox1_curated_scaffold_598_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

28024..29928
DNA (1905bp) protein (635aa)
aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2] bin=BACIGN_2 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
aminopeptidase N
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_598_24
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

29928..30479
DNA (552bp) protein (184aa)
Aminopeptidase N bin=GWF2_Ignavibacteria_33_9 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_598_25
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30498..31022
DNA (525bp) protein (175aa)
hypothetical protein Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000362780E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHW62075.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium orientale.;"
anamox1_curated_scaffold_598_26
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31075..31527
DNA (453bp) protein (151aa)
CMP/dCMP deaminase zinc-binding protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KVQ4_HALH1
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22454.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
CMP/dCMP deaminase zinc-binding protein
anamox1_curated_scaffold_598_27
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31580..32248
DNA (669bp) protein (223aa)
Oxidoreductase FAD/NAD(P)-binding domain protein Tax=Niabella soli DSM 19437 RepID=H1NM24_9SPHI
flavodoxin reductase
Flavodoxin reductase {ECO:0000313|EMBL:AHF14535.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
anamox1_curated_scaffold_598_28
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

32281..33534
DNA (1254bp) protein (418aa)
Cystathionine beta-lyase/cystathionine gamma-synthase bin=GWF2_Ignavibacteria_35_20 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
cys/met metabolism pyridoxal-phosphate-dependent protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
anamox1_curated_scaffold_598_29
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(33583..34590)
DNA (1008bp) protein (336aa)
Tetraacyldisaccharide 4'-kinase bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=Veillonella taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
tetraacyldisaccharide 4'-kinase (LpxK)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_598_30
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(34587..35162)
DNA (576bp) protein (192aa)
Uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Displaying items 1-30 of 40 in total

View Taxonomy