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anamox1_curated_scaffold_2280

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2280_1
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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2..517
DNA (516bp) protein (172aa)
Putative pyridoxal phosphate-dependent enzyme bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
pyridoxal phosphate-dependent enzyme
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2280_2
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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505..1518
DNA (1014bp) protein (338aa)
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
exopolyphosphatase-like protein
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_2280_3

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1624..2190
DNA (567bp) protein (189aa)
RNA polymerase subunit sigma-24 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B68934
Marine sediment metagenome DNA, contig: S06H3_S08300 {ECO:0000313|EMBL:GAI24442.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
RNA polymerase, sigma-24 subunit, RpoE
anamox1_curated_scaffold_2280_4
unknown

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2180..2956
DNA (777bp) protein (259aa)

This feature has no annotations

anamox1_curated_scaffold_2280_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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2998..3693
DNA (696bp) protein (232aa)
Uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2280_6
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

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comp(3770..4243)
DNA (474bp) protein (158aa)
greA; Transcription elongation factor; K03624 transcription elongation factor GreA bin=BACIGN_2 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
transcription elongation factor GreA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2280_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(4401..5606)
DNA (1206bp) protein (402aa)
GTP cyclohydrolase-2 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
GTP cyclohydrolase-2
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2280_8
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

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comp(5619..5936)
DNA (318bp) protein (106aa)
hypothetical protein; K03210 preprotein translocase subunit YajC bin=BACIGN_2 species=Chlorobium chlorochromatii genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=BACIGN_2 organism_group=Unknown_CP
yajC; preprotein translocase subunit YajC
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_2280_9
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(6007..7164)
DNA (1158bp) protein (386aa)
Queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] bin=BACIGN_2 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
queuine tRNA-ribosyltransferase
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_2280_10
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(7332..9272)
DNA (1941bp) protein (647aa)
OmpA/MotB domain protein bin=GWB2_Ignavibacteria_35_12 species=Nonlabens dokdonensis genus=Nonlabens taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
OmpA/MotB domain-containing protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_2280_11
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(9316..10506)
DNA (1191bp) protein (397aa)
dnaJ; Molecular chaperone DnaJ; K03686 molecular chaperone DnaJ bin=BACIGN_2 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
chaperone protein DnaJ
Tax=CG_Ignavi_01
anamox1_curated_scaffold_2280_12
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10596..10940)
DNA (345bp) protein (115aa)
DNA (Cytosine-5-)-methyltransferase Tax=Prevotella disiens JCM 6334 = ATCC 29426 RepID=U2JK61_9BACT
putative type II DNA modification methylase
Tax=CG_Ignavi_01
anamox1_curated_scaffold_2280_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(11501..12145)
DNA (645bp) protein (215aa)
Protein GrpE bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
grpE; Molecular chaperone GrpE
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_2280_14
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12353..12658
DNA (306bp) protein (102aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Peptide methionine sulfoxide reductase MsrA Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGI7_NIAKG
Peptide methionine sulfoxide reductase msrA
anamox1_curated_scaffold_2280_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12649..13026
DNA (378bp) protein (126aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
Peptide methionine sulfoxide reductase MsrA Tax=Fulvivirga imtechensis AK7 RepID=L8JQ92_9BACT
methionine-S-sulfoxide reductase
anamox1_curated_scaffold_2280_16
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

13042..13680
DNA (639bp) protein (213aa)
type 11 methyltransferase Tax=Calescamantes bacterium JGI 0000106-G12 RepID=UPI0003B72DD8
methyltransferase family protein
Tax=CG_Arma_02
Displaying 16 items

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