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anamox1_curated_scaffold_1489

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1489_1
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

1..243
DNA (243bp) protein (81aa)
replicative DNA helicase
Replicative DNA helicase bin=GWF2_Ignavibacteria_33_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=GWF2_RIF_IGX_33_9_curated
anamox1_curated_scaffold_1489_2
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

425..1927
DNA (1503bp) protein (501aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
UDP-N-acetylmuramyl tripeptide synthetase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

2131..2583
DNA (453bp) protein (151aa)
ABC-type multidrug transport system ATPase component Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AP77_IGNAJ
multidrug ABC transporter ATPase
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:AFH50784.1}; species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
anamox1_curated_scaffold_1489_4
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

2589..3497
DNA (909bp) protein (303aa)
Peptidoglycan-binding LysM bin=GWF2_OP3_38_59 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
peptidoglycan-binding LysM
Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
anamox1_curated_scaffold_1489_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

3553..4845
DNA (1293bp) protein (431aa)
NADH dehydrogenase bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
ndh; NADH dehydrogenase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_6
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4846..5106)
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S4C1_PEDSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY50878.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
anamox1_curated_scaffold_1489_7
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

5265..6509
DNA (1245bp) protein (415aa)
CinA-like protein bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
competence/damage-inducible protein CinA
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_8
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists


6510..7559
DNA (1050bp) protein (350aa)
DNA-binding/iron metalloprotein/AP endonuclease (EC:3.4.24.-)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp bin=GWA2_Ignavibacteria-rel_35_8 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_9
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(7655..10573)
DNA (2919bp) protein (973aa)
Outer membrane protein Omp28 bin=GWF2_Ignavibacteria_33_9 species=Aequorivita sublithincola genus=Aequorivita taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Outer membrane protein Omp28
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1489_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(11132..12259)
DNA (1128bp) protein (376aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG (EC:1.17.7.1)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase bin=GWA2_Ignavibacteria_55_11 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_1489_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(12289..13197)
DNA (909bp) protein (303aa)
Uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_12
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(13240..14481)
DNA (1242bp) protein (414aa)
pgk; 3-Phosphoglycerate kinase; K00927 phosphoglycerate kinase [EC:2.7.2.3] bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
pgk; 3-Phosphoglycerate kinase
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_13
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(14481..16409)
DNA (1929bp) protein (643aa)
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16); K00820 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16] bin=BACIGN_2 species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=BACIGN_2 organism_group=Unknown_CP
glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1489_14
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

16620..18074
DNA (1455bp) protein (485aa)
carbamoyl-phosphate synthase L chain ATP-binding; K01961 acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] bin=BACIGN_2 species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=BACIGN_2 organism_group=Unknown_CP
carbamoyl-phosphate synthase L chain ATP-binding
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
anamox1_curated_scaffold_1489_15
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18091..19098
DNA (1008bp) protein (336aa)
Glucanase {ECO:0000313|EMBL:KJS06974.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales.;" source="Flavobacteriales bacterium BRH_c54.;"
deblocking aminopeptidase bin=BACIGN_2 species=unknown genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=BACIGN_2 organism_group=Unknown_CP
deblocking aminopeptidase
anamox1_curated_scaffold_1489_16
Chlorobium sp. GBChlB, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19141..19797
DNA (657bp) protein (219aa)
Cyclic nucleotide-binding protein Tax=uncultured bacterium RepID=K1ZN16_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KER11147.1}; species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium sp. GBChlB.;"
cyclic nucleotide-binding protein
anamox1_curated_scaffold_1489_17
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

19863..20867
DNA (1005bp) protein (335aa)
Bifunctional sugar kinase/adenylyltransferase bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Bifunctional sugar kinase/adenylyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_1489_18
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

20864..21352
DNA (489bp) protein (163aa)
rfaE_2; bifunctional protein RfaE, domain II (EC:2.7.7.-)
Bifunctional protein RfaE, domain II bin=GWB2_Ignavibacteria_35_12 species=Persephonella marina genus=Persephonella taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
anamox1_curated_scaffold_1489_19
unknown

Not on your lists

comp(21327..21446)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 19 items

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