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anamox1_curated_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_214_1
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(82..444)
DNA (363bp) protein (121aa)
id=4288332 bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
hypothetical protein
Tax=CG_TM7_01
anamox1_curated_scaffold_214_2
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(441..1667)
DNA (1227bp) protein (409aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YLJ5_9BACT
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
anamox1_curated_scaffold_214_3

Not on your lists

comp(1682..3247)
DNA (1566bp) protein (522aa)
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KN68_ARCVS
Lysine-tRNA ligase {ECO:0000313|EMBL:KKW07161.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_16.;"
anamox1_curated_scaffold_214_4

Not on your lists

comp(3280..3744)
DNA (465bp) protein (155aa)
Transcription elongation factor GreA Tax=uncultured bacterium RepID=K2CJT8_9BACT
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
greA; transcription elongation factor GreA
anamox1_curated_scaffold_214_5
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists

comp(3912..5885)
DNA (1974bp) protein (658aa)
Peptidoglycan glycosyltransferase bin=GWC1_TM7_41_48 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_TM7_41_48 organism_group=TM7
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:KKS09706.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
penicillin-binding protein 2
anamox1_curated_scaffold_214_6
unknown

Not on your lists

comp(5894..6391)
DNA (498bp) protein (166aa)

This feature has no annotations

anamox1_curated_scaffold_214_7

Not on your lists

comp(6394..7188)
DNA (795bp) protein (265aa)
Cell shape-determining protein MreC Tax=uncultured bacterium RepID=K1ZI06_9BACT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rod shape-determining protein MreC
anamox1_curated_scaffold_214_8
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(7192..8244)
DNA (1053bp) protein (351aa)
Rod shape-determining protein MreB bin=GWD1_TM7_39_7 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
rod shape-determining protein MreB
Tax=CG_CPR16-01
anamox1_curated_scaffold_214_9
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(8300..9049)
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Planococcus antarcticus DSM 14505 RepID=I4WZT0_9BACL
abortive infection protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
anamox1_curated_scaffold_214_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(9046..10131)
DNA (1086bp) protein (362aa)
Uncharacterized protein Tax=Candidatus Saccharimonas aalborgensis RepID=R4PXF9_9BACT
membrane protein of unknown function
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
anamox1_curated_scaffold_214_11
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10125..10829)
DNA (705bp) protein (235aa)
uppS; di-trans,poly-cis-decaprenylcistransferase (EC:2.5.1.31)
Isoprenyl transferase Tax=Azospirillum sp. CAG:260 RepID=R6HRE3_9PROT
Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
anamox1_curated_scaffold_214_12
GWA1_Kazan_50_15_curated, Kazan, Bacteria

Not on your lists

comp(10833..11393)
DNA (561bp) protein (187aa)
Ribosome-recycling factor bin=GWA1_Kazan_50_15 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
ribosome recycling factor
Tax=GWA1_Kazan_50_15_curated
anamox1_curated_scaffold_214_13
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11412..12008)
DNA (597bp) protein (199aa)
Elongation factor Ts Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0ILB7_THETR
translation elongation factor Ts
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
anamox1_curated_scaffold_214_14
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists


comp(12010..12753)
DNA (744bp) protein (248aa)
30S ribosomal protein S2 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GT76_SELRL
rpsB; putative 30S ribosomal protein S2
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
anamox1_curated_scaffold_214_15
R_RIF_OD1_07_48_16, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(12936..14717)
DNA (1782bp) protein (594aa)
ABC transporter-related protein bin=GWC2_TM7_44_17 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_07_48_16_curated
anamox1_curated_scaffold_214_16
RHI_Saccharibacteria_41_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

14915..15514
DNA (600bp) protein (200aa)
Transglycosylase domain protein Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LU15_ACIC1
transglycosylase domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_41_12_curated
anamox1_curated_scaffold_214_17
unknown

Not on your lists

comp(15697..16194)
DNA (498bp) protein (166aa)

This feature has no annotations

anamox1_curated_scaffold_214_18
unknown

Not on your lists

16267..16569
DNA (303bp) protein (101aa)

This feature has no annotations

anamox1_curated_scaffold_214_19
unknown

Not on your lists

comp(16491..16982)
DNA (492bp) protein (164aa)

This feature has no annotations

anamox1_curated_scaffold_214_20
R_RIF_OD1_10_44_22b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

17120..17833
DNA (714bp) protein (238aa)
Uncharacterized protein bin=GWA1_ZB2_49_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_44_22b_curated
anamox1_curated_scaffold_214_21
unknown

Not on your lists

17901..18605
DNA (705bp) protein (235aa)

This feature has no annotations

anamox1_curated_scaffold_214_22
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18736..19644)
DNA (909bp) protein (303aa)
Delta 9 acyl-lipid fatty acid desaturase (Modular protein) {ECO:0000313|EMBL:CCM65669.1}; EC=1.14.19.1 {ECO:0000313|EMBL:CCM65669.1};; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Delta-9 acyl-phospholipid desaturase (EC:1.14.19.-)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI000373E17B
anamox1_curated_scaffold_214_23
R_OP11_Woesebacteria_41_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

19913..20344
DNA (432bp) protein (144aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_41_10_curated
anamox1_curated_scaffold_214_24
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists


20383..20721
DNA (339bp) protein (113aa)
50S ribosomal protein L31 bin=GWD1_TM7_39_7 species=Treponema phagedenis genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
50S ribosomal protein L31 {ECO:0000313|EMBL:KKQ95266.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
rpmE; 50S ribosomal protein L31
anamox1_curated_scaffold_214_25
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20781..21836
DNA (1056bp) protein (352aa)
Peptide chain release factor 1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S010_THEOJ
peptide chain release factor 1 (bRF-1)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermosediminibacter.;" source="Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 /; JW/IW-1228P).;"
anamox1_curated_scaffold_214_26
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

21836..22645
DNA (810bp) protein (270aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Release factor glutamine methyltransferase Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I088_CALAS
hemK; protein methyltransferase HemK
anamox1_curated_scaffold_214_27
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(22679..23767)
DNA (1089bp) protein (363aa)
protease Do bin=GWC2_TM7_48_9 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Protease Do {ECO:0000313|EMBL:KKW02536.1}; species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9.;"
protease Do
anamox1_curated_scaffold_214_28
unknown

Not on your lists

comp(23884..24660)
DNA (777bp) protein (259aa)

This feature has no annotations

anamox1_curated_scaffold_214_29

Not on your lists

comp(24683..26101)
DNA (1419bp) protein (473aa)
probable transcription regulator bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Putative transcription regulator {ECO:0000313|EMBL:EKD56763.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
LytR family transcriptional protein
anamox1_curated_scaffold_214_30
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

26278..27000
DNA (723bp) protein (241aa)
signal peptidase I (EC:3.4.21.89)
hypothetical protein Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000382DE9F
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
Displaying items 1-30 of 110 in total

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