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anamox1_curated_scaffold_1978

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1978_1
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

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164..1474
DNA (1311bp) protein (437aa)
Recombinase bin=GWA2_Elusimicrobia_56_46 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
recombinase
Tax=CG_Wolfe_01
anamox1_curated_scaffold_1978_2
unknown

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comp(1718..2698)
DNA (981bp) protein (327aa)

This feature has no annotations

anamox1_curated_scaffold_1978_3
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(2718..3767)
DNA (1050bp) protein (350aa)
bifunctional phosphoglucose/phosphomannose isomerase
id=5226278 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
anamox1_curated_scaffold_1978_4
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(4165..5808)
DNA (1644bp) protein (548aa)
chaperonin GroEL; K04077 chaperonin GroEL bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
groEL; molecular chaperone GroEL
Tax=CG_CPR16-01
anamox1_curated_scaffold_1978_5
GWC1_CPR2_41_48, CPR2, Bacteria

Not on your lists

comp(5808..6077)
DNA (270bp) protein (90aa)
10 kDa chaperonin bin=GWC1_TM7_41_48 species=unknown genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_TM7_41_48 organism_group=TM7
10 kDa chaperonin {ECO:0000313|EMBL:KKS09392.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
Co-chaperonin GroES (HSP10)
anamox1_curated_scaffold_1978_6
unknown

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comp(6273..6518)
DNA (246bp) protein (82aa)

This feature has no annotations

anamox1_curated_scaffold_1978_7
Frankia sp. CcI6, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6575..6802)
DNA (228bp) protein (76aa)
UPI0003CFD171 related cluster Tax=unknown RepID=UPI0003CFD171
Uncharacterized protein {ECO:0000313|EMBL:ETA01691.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;"
anamox1_curated_scaffold_1978_8
R_SM2F11_43_13b, SM2F11, Bacteria

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comp(6992..7858)
DNA (867bp) protein (289aa)
id=5095627 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
anamox1_curated_scaffold_1978_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7862..9199)
DNA (1338bp) protein (446aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase {ECO:0000313|EMBL:ACZ38790.1}; EC=5.4.2.8 {ECO:0000313|EMBL:ACZ38790.1};; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
Phosphomannomutase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3H3_SPHTD
anamox1_curated_scaffold_1978_10
GWE2_OD1_35_164, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

9323..10303
DNA (981bp) protein (327aa)
seg 219..231 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:KKP74391.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE2_35_164.;"
anamox1_curated_scaffold_1978_11
unknown

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10330..10506
DNA (177bp) protein (59aa)

This feature has no annotations

anamox1_curated_scaffold_1978_12
GWE1_OD1_ACD7_35_17, Moranbacteria, Parcubacteria, Bacteria

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comp(10523..12112)
DNA (1590bp) protein (530aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K2BMB4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKP69015.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Moranbacteria) bacterium GW2011_GWE1_35_17.;"
anamox1_curated_scaffold_1978_13
Candidatus Saccharimonas aalborgensis, Candidatus Saccharimonas, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(12141..13184)
DNA (1044bp) protein (348aa)
Putative Methicillin resistance protein Tax=Candidatus Saccharimonas aalborgensis RepID=R4PWZ4_9BACT
putative Methicillin resistance protein
Putative Methicillin resistance protein {ECO:0000313|EMBL:AGL62262.1}; species="Bacteria; Candidatus Saccharibacteria; Candidatus Saccharimonas.;" source="Candidatus Saccharimonas aalborgensis.;"
anamox1_curated_scaffold_1978_14

Not on your lists

comp(13174..14142)
DNA (969bp) protein (323aa)
FemAB family protein (Fragment) Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UTM4_9MICC
FemAB family {ECO:0000313|EMBL:AIA17116.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
FemAB family peptidoglycan biosynthesis protein
anamox1_curated_scaffold_1978_15
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

Not on your lists


14257..15285
DNA (1029bp) protein (343aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp bin=GWC2_TM7_44_17 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
tRNA threonylcarbamoyladenosine biosynthesis protein Gcp
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
anamox1_curated_scaffold_1978_16
Fusarium pseudograminearum, Fusarium, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

comp(15282..16511)
DNA (1230bp) protein (410aa)
Uncharacterized protein Tax=Fusarium pseudograminearum (strain CS3096) RepID=K3VHI4_FUSPC
Uncharacterized protein {ECO:0000313|EMBL:EKJ73867.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Nectriaceae; Fusarium.;" source="Fusarium pseudograminearum (strain CS3096) (Wheat and barley crown-rot; fungus).;"
hypothetical protein
anamox1_curated_scaffold_1978_17
RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists


16614..16994
DNA (381bp) protein (127aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKF7_THEYD bin=GWF1_OP11_31_35_complete species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Tax=RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated
anamox1_curated_scaffold_1978_18
R_RIF_OD1_10_44_22b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists


16948..17160
DNA (213bp) protein (71aa)
valyl-tRNA synthetase (EC:6.1.1.9)
Suspect SCG annotation. See neighboring gene [anamox1_curated_scaffold_1978_17].
Valine--tRNA ligase bin=GWC1_CPR2_39_9 species=Clostridium clariflavum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_44_22b_curated
Displaying 18 items

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