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anamox1_curated_scaffold_1870

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1870_1
CG_CPR17-01, CG_CPR17, Bacteria

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132..755
DNA (624bp) protein (208aa)
50S ribosomal protein L19 bin=GWC1_CPR2_39_9 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
50S ribosomal protein L19
Tax=CG_CPR17-01
anamox1_curated_scaffold_1870_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

826..1434
DNA (609bp) protein (203aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Ribonuclease HII Tax=Syntrophus aciditrophicus (strain SB) RepID=RNH2_SYNAS
anamox1_curated_scaffold_1870_3
RBG_16_Gamma2_64_11_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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1431..1784
DNA (354bp) protein (118aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
UPF0102 protein BN479_00915 Tax=Clostridium sp. CAG:122 RepID=R5RZJ0_9CLOT
Tax=RBG_16_Gamma2_64_11_curated
anamox1_curated_scaffold_1870_4
unknown

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1833..2129
DNA (297bp) protein (99aa)

This feature has no annotations

anamox1_curated_scaffold_1870_5
GWC2_CPR2_39_10, CPR2, Bacteria

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2310..3569
DNA (1260bp) protein (420aa)
NusA antitermination factor bin=GWC1_CPR2_39_9 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
NusA antitermination factor {ECO:0000313|EMBL:KKQ93718.1}; species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
NusA antitermination factor
anamox1_curated_scaffold_1870_6
GWC2_CPR2_39_35, CPR2, Bacteria

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3634..6111
DNA (2478bp) protein (826aa)
ATPase AAA-2 domain protein bin=GWC1_TM7_41_48 species=unknown genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_TM7_41_48 organism_group=TM7
negative regulator of genetic competence clpC/mecB
Tax=GWC2_CPR2_39_35
anamox1_curated_scaffold_1870_7
RHI_Saccharibacteria_42_8, Candidatus Saccharibacteria, Bacteria

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6152..7486
DNA (1335bp) protein (445aa)
radA; DNA repair protein (EC:2.1.1.63)
DNA repair protein RadA (Fragment) bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
Tax=RIFCSPHIGHO2_12_FULL_Saccharibacteria_42_8_curated
anamox1_curated_scaffold_1870_8

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7500..8339
DNA (840bp) protein (280aa)
PilT protein domain protein {ECO:0000313|EMBL:KKT87089.1}; species="Bacteria.;" source="bacterium GW2011_GWB1_45_10.;"
Uncharacterized protein bin=GWC1_CPR2_39_9 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
PilT protein domain-containing protein
anamox1_curated_scaffold_1870_9
CG_CPR16-01, CG_CPR16, Bacteria

Not on your lists

comp(8391..11255)
DNA (2865bp) protein (955aa)
Penicillin-binding protein, 1A family bin=GWB1_Berkelbacteria_38_5 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWB1_Berkelbacteria_38_5 organism_group=ACD58 (Berkelbacteria)
hypothetical protein
Tax=CG_CPR16-01
anamox1_curated_scaffold_1870_10
CG_CPR07_01, CG_CPR07, Bacteria

Not on your lists

11307..12506
DNA (1200bp) protein (400aa)
bcl:ABC2758 tyrZ; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
tyrosyl-tRNA synthetase
Tax=CG_CPR07_01
anamox1_curated_scaffold_1870_11
CG_TM7_01, Candidatus Saccharibacteria, Bacteria

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12503..14548
DNA (2046bp) protein (682aa)
ATP-dependent DNA helicase RecG bin=GWC2_TM7_44_17 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version
hypothetical protein
Tax=CG_TM7_01
anamox1_curated_scaffold_1870_12
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

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14558..15328
DNA (771bp) protein (257aa)
hypothetical protein
seg bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
Uncharacterized protein {ECO:0000313|EMBL:AHB42665.1}; species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
anamox1_curated_scaffold_1870_13
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15321..15869
DNA (549bp) protein (183aa)
methyltransferase Tax=Dehalobacter sp. E1 RepID=UPI0002DE801D
methyltransferase
Tax=BJP_IG2158_Thermincola_46_17
anamox1_curated_scaffold_1870_trna_1
unknown

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15894..15977
DNA (84bp)
transferRNA Leu
Displaying 14 items

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