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anamox1_curated_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 773 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_0_1
unknown

Not on your lists

comp(2..538)
DNA (537bp) protein (179aa)

This feature has no annotations

anamox1_curated_scaffold_0_2
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

785..1027
DNA (243bp) protein (81aa)
Helix-turn-helix domain protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYN9_HALH1
helix-turn-helix domain-containing protein
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEE50445.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
anamox1_curated_scaffold_0_3
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1014..1325
DNA (312bp) protein (104aa)
HipA N-terminal domain protein bin=GWB2_Bacteroidetes_32_14 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein
Tax=GWD2_Bacteroidetes_33_33_curated
anamox1_curated_scaffold_0_4
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1322..2272
DNA (951bp) protein (317aa)
phosphatidylinositol kinase Tax=Fluoribacter dumoffii RepID=UPI00026C7840
Serine/threonine-protein kinase HipA {ECO:0000313|EMBL:GAN24393.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila.;"
hypothetical protein
anamox1_curated_scaffold_0_5
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(2269..3120)
DNA (852bp) protein (284aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LLX8_HALO1
hypothetical protein
Tax=RBG_16_Bdellovibrionales_40_8_curated
anamox1_curated_scaffold_0_6
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3117..3473)
DNA (357bp) protein (119aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YZ93_9BACT
PemK-like protein
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_0_7
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3460..3681)
DNA (222bp) protein (74aa)
hypothetical protein bin=ACD73 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_0_8
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3766..5361)
DNA (1596bp) protein (532aa)
propionyl-CoA carboxylase (EC:6.4.1.3) bin=bin7_NC10_sister species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
propionyl-CoA carboxylase (EC:6.4.1.3)
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
anamox1_curated_scaffold_0_9
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5394..6545)
DNA (1152bp) protein (384aa)
Butyryl-CoA dehydrogenase protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2SKK6_9DELT
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
anamox1_curated_scaffold_0_10
R_Nitrospinae_39_10, Nitrospinae, Bacteria

Not on your lists


comp(6623..7915)
DNA (1293bp) protein (431aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=SYH_GEOLS
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
anamox1_curated_scaffold_0_11
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7944..8738)
DNA (795bp) protein (265aa)
TPR repeat-containing protein bin=ACD73 species=ACD73 genus=ACD73 taxon_order=ACD73 taxon_class=ACD73 phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_40_28_curated
anamox1_curated_scaffold_0_12
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8748..9251)
DNA (504bp) protein (168aa)
3-dehydroquinate dehydratase {ECO:0000255|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000255|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000255|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000255|HAMAP-Rule:MF_00169}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
hypothetical protein Tax=Geitlerinema sp. PCC 7105 RepID=UPI000380032F
aroQ; 3-dehydroquinate dehydratase
anamox1_curated_scaffold_0_13
unknown

Not on your lists

comp(9235..9843)
DNA (609bp) protein (203aa)

This feature has no annotations

anamox1_curated_scaffold_0_14
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9846..11420)
DNA (1575bp) protein (525aa)
aroB-aroK; bifunctional 3-dehydroquinate synthase/shikimate kinase (EC:2.7.1.71 4.2.3.4)
hypothetical protein Tax=Massilia niastensis RepID=UPI000363258C
3-dehydroquinate synthase {ECO:0000313|EMBL:EKU84216.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
anamox1_curated_scaffold_0_15
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11426..12604)
DNA (1179bp) protein (393aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
Chorismate synthase Tax=Paenibacillus RepID=F5LDF3_9BACL
chorismate synthase
anamox1_curated_scaffold_0_16
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12678..12914)
DNA (237bp) protein (79aa)
Transcriptional regulator, XRE family bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
XRE family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
anamox1_curated_scaffold_0_17
R_Deltaproteobacteria_44_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13101..13910)
DNA (810bp) protein (270aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme bin=GWC2_Geobacteraceae_55_20 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
type 4 prepilin-like proteins leader peptide processing enzyme
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_16_curated
anamox1_curated_scaffold_0_18
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14020..14331
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Plesiocystis pacifica SIR-1 RepID=A6G351_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EDM79676.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
hypothetical protein
anamox1_curated_scaffold_0_19
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14339..14620
DNA (282bp) protein (94aa)
gatC; Aspartyl-tRNA(Asn) amidotransferase subunit C, Glutamyl-tRNA(Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C Tax=Dehalobacter RepID=K4KT60_9FIRM
anamox1_curated_scaffold_0_20
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14620..16080
DNA (1461bp) protein (487aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:3.5.1.4)
Glutamyl-tRNA(Gln) amidotransferase subunit A bin=GWD2_Desulfuromonadales_54_10 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
anamox1_curated_scaffold_0_21
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16077..17513
DNA (1437bp) protein (479aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 2 bin=GWC2_Syntrophus__56_31 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
Tax=GWC2_Syntrophus_56_31_curated
anamox1_curated_scaffold_0_22
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17514..18557
DNA (1044bp) protein (348aa)
aIF-2BI family translation initiation factor (EC:5.3.1.23)
Methylthioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; Short=M1Pi {ECO:0000255|HAMAP-Rule:MF_01678};; Short=MTR-1-P isomerase {ECO:0000255|HAMAP-Rule:MF_01678};; EC=5.3.1.23 {ECO:0000255|HAMAP-Rule:MF_01678};; S-methyl-5-thioribose-1-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_01678}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Methylthioribose-1-phosphate isomerase Tax=Geobacter uraniireducens (strain Rf4) RepID=MTNA_GEOUR
anamox1_curated_scaffold_0_23
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18595..19512
DNA (918bp) protein (306aa)
drt:Dret_0505 branched-chain amino acid aminotransferase; K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] bin=ACD73 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD73 organism_group=Proteobacteria organism_desc=Unknown
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Tax=GWA2_Deltaproteobacteria_45_12_curated
anamox1_curated_scaffold_0_24
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19517..20446)
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C1W5_NITHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE14748.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
anamox1_curated_scaffold_0_25
unknown

Not on your lists

comp(20550..20879)
DNA (330bp) protein (110aa)

This feature has no annotations

anamox1_curated_scaffold_0_26
Geobacter metallireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21138..22994)
DNA (1857bp) protein (619aa)
UvrABC system protein C Tax=Geobacter metallireducens RepID=UVRC_GEOMG
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000255|HAMAP-Rule:MF_00203}; Short=Protein UvrC {ECO:0000255|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000255|HAMAP-Rule:MF_00203}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210).;"
anamox1_curated_scaffold_0_27
Aquifex aeolicus, Aquifex, Aquificales, Aquificae, Aquificae, Bacteria

Not on your lists

23053..25059
DNA (2007bp) protein (669aa)
N-methylhydantoinase A Tax=Aquifex aeolicus (strain VF5) RepID=O66925_AQUAE
hyuA; N-methylhydantoinase A
N-methylhydantoinase A {ECO:0000313|EMBL:AAC06888.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.;" source="Aquifex aeolicus (strain VF5).;"
anamox1_curated_scaffold_0_28
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

Not on your lists

25052..26653
DNA (1602bp) protein (534aa)
5-oxoprolinase (ATP-hydrolyzing) (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S0V0_DESTD
Tax=RBG_13_Aminicenantes_62_12_curated
anamox1_curated_scaffold_0_29
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

26650..28071
DNA (1422bp) protein (474aa)
Drug resistance transporter, EmrB/QacA subfamily Tax=Nitrolancetus hollandicus Lb RepID=I4EJ03_9CHLR
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:CCF84665.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
major facilitator transporter
anamox1_curated_scaffold_0_30
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28117..29352
DNA (1236bp) protein (412aa)
hypothetical protein Tax=Virgibacillus halodenitrificans RepID=UPI0002F5856E
putative FAD dependent oxidoreductase
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
Displaying items 1-30 of 773 in total

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