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anamox1_curated_scaffold_2834

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2834_1
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134..1246)
DNA (1113bp) protein (371aa)
DNA-binding protein Tax=Anaerococcus obesiensis RepID=UPI0002F1DA22
PilT protein domain-containing protein
Tax=RBG_13_Deltaproteobacteria_53_10_curated
anamox1_curated_scaffold_2834_2
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

1405..2247
DNA (843bp) protein (281aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000371EC4B
phosphatase
Tax=CG_Arma_02
anamox1_curated_scaffold_2834_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

2318..4669
DNA (2352bp) protein (784aa)
Tetratricopeptide TPR_2 repeat protein bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2834_4
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

4701..6428
DNA (1728bp) protein (576aa)
von Willebrand factor type A like domain bin=GWF2_OP3_38_59 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
hypothetical protein
Tax=GWF2_Lentisphaerae_50_93_curated
anamox1_curated_scaffold_2834_5
bacterium UASB14, Bacteria

Not on your lists

comp(6440..7954)
DNA (1515bp) protein (505aa)
Glycosyltransferase Tax=Beggiatoa alba B18LD RepID=I3CK88_9GAMM
AprG2 protein {ECO:0000313|EMBL:GAK54100.1}; species="Bacteria.;" source="bacterium UASB14.;"
Glycosyl transferases group 1
anamox1_curated_scaffold_2834_6
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7951..9111)
DNA (1161bp) protein (387aa)
Response regulator receiver modulated serine phosphatase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3D6_GEODF
response regulator receiver modulated serine phosphatase
Response receiver-modulated serine phosphatase, SpoIIE domain-containing {ECO:0000313|EMBL:ACM19546.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
anamox1_curated_scaffold_2834_7
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9415..10626
DNA (1212bp) protein (404aa)
Cofactor-independent phosphoglycerate mutase {ECO:0000313|EMBL:EDL56572.1}; EC=5.4.2.- {ECO:0000313|EMBL:EDL56572.1};; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
phosphoglycerate mutase (EC:5.4.2.1)
Cofactor-independent phosphoglycerate mutase Tax=Planctomyces maris DSM 8797 RepID=A6CFH2_9PLAN
anamox1_curated_scaffold_2834_8
Brevibacillus panacihumi, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10630..11925)
DNA (1296bp) protein (432aa)
ATP-dependent protease Tax=Brevibacillus panacihumi W25 RepID=V6MEG0_9BACL
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus panacihumi W25.;"
clpX; ATP-dependent Clp protease ATP-binding subunit
anamox1_curated_scaffold_2834_9
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11940..12545)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
clpP; ATP-dependent Clp protease proteolytic subunit clpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEZ2_9FIRM
anamox1_curated_scaffold_2834_10
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12604..13944)
DNA (1341bp) protein (447aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
Trigger factor Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KCX5_HALHC
trigger factor
anamox1_curated_scaffold_2834_11
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

14278..15750
DNA (1473bp) protein (491aa)
Carbamoyl-phosphate synthase L chain ATP-binding bin=GWC2_Ignavibacteria_56_12 species=unknown genus=unknown taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
carbamoyl-phosphate synthase large subunit
Tax=RBG_13_Actinobacteria_55_18_curated
anamox1_curated_scaffold_2834_12
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15828..16643
DNA (816bp) protein (272aa)
Xylose isomerase domain-containing protein TIM barrel Tax=Rhodopirellula maiorica SM1 RepID=M5RNI7_9PLAN
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:EMI20855.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
sugar phosphate isomerase/epimerase
anamox1_curated_scaffold_2834_13
unknown

Not on your lists

comp(16718..17209)
DNA (492bp) protein (164aa)

This feature has no annotations

anamox1_curated_scaffold_2834_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17262..17942)
DNA (681bp) protein (227aa)
Thymidylate kinase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thymidylate kinase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
anamox1_curated_scaffold_2834_15
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17939..18622)
DNA (684bp) protein (228aa)
Thymidylate kinase Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRU7_9CHLR
thymidylate kinase
Tax=GWA2_Deltaproteobacteria_54_12_curated
anamox1_curated_scaffold_2834_16
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18704..18904)
DNA (201bp) protein (67aa)
50S ribosomal protein L31 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZX08_MAHA5
50S ribosomal protein L31
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;" source="Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON).;"
anamox1_curated_scaffold_2834_17
unknown

Not on your lists

comp(18945..19157)
DNA (213bp) protein (71aa)

This feature has no annotations

anamox1_curated_scaffold_2834_18
CG_Syntroph_02, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19667..20662
DNA (996bp) protein (332aa)
Putative signal peptide Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RSV9_ALLVD
putative signal peptide
Tax=CG_Syntroph_02
anamox1_curated_scaffold_2834_19
RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

21164..22741
DNA (1578bp) protein (526aa)
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_9_curated
anamox1_curated_scaffold_2834_20
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(22818..23867)
DNA (1050bp) protein (350aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037998B0
fructose-1,6-bisphosphate aldolase
Tax=RBG_16_OP11_Levybacteria_35_11_curated
anamox1_curated_scaffold_2834_21
unknown

Not on your lists

comp(24388..28533)
DNA (4146bp) protein (1382aa)

This feature has no annotations

anamox1_curated_scaffold_2834_22

Not on your lists

comp(28612..29754)
DNA (1143bp) protein (381aa)
Marine sediment metagenome DNA, contig: S12H4_L00754 {ECO:0000313|EMBL:GAI80008.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Hypothetical conserved protein bin=GWC2_Bacteroidetes_40_22 species=uncultured prokaryote genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
anamox1_curated_scaffold_2834_23
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29774..32563)
DNA (2790bp) protein (930aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037064F2
alpha-mannosidase
Tax=RBG_16_Planctomycetes_64_10_curated
anamox1_curated_scaffold_2834_trna_1
unknown

Not on your lists

32690..32762
DNA (73bp)
transferRNA Lys
anamox1_curated_scaffold_2834_24
unknown

Not on your lists

32903..32992
DNA (90bp) protein (30aa)

This feature has no annotations

anamox1_curated_scaffold_2834_25
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

32989..33378
DNA (390bp) protein (130aa)
Protein CrcB homolog bin=GWC2_Nitrospirae-rel_56_14 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
CrcB protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
anamox1_curated_scaffold_2834_26
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34095..35432)
DNA (1338bp) protein (446aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000361B61A
Putative NADH-dependent dyhydrogenase {ECO:0000313|EMBL:CDE58467.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:409.;"
oxidoreductase domain-containing protein
anamox1_curated_scaffold_2834_27
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35539..36516)
DNA (978bp) protein (326aa)
glycosyl transferase family protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
glycosyl transferase
Tax=RBG_13_Deltaproteobacteria_43_22_curated
anamox1_curated_scaffold_2834_28
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(36649..37491)
DNA (843bp) protein (281aa)
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000381822F
N-terminal methylation motif domain-containing protein
Tax=BJP_IG2102_BRC1_58_13
anamox1_curated_scaffold_2834_29
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

37781..38887
DNA (1107bp) protein (369aa)
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase bin=GWC2_Nitrospirae_57_13 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
Tax=GWC2_Nitrospirae_57_13_curated
Displaying items 1-30 of 34 in total

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