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anamox1_curated_scaffold_938

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_938_1
RLO_PLX_64_10, Bacteria

Not on your lists

3..563
DNA (561bp) protein (187aa)
Hypothetical conserved protein Tax=uncultured Acidobacteria bacterium RepID=H5SCG2_9BACT
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
anamox1_curated_scaffold_938_2
CG_Alphaprot_01, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

560..1357
DNA (798bp) protein (266aa)
hypothetical protein Tax=Amycolatopsis methanolica RepID=UPI00036A85D1
metal-dependent hydrolase
Tax=CG_Alphaprot_01
anamox1_curated_scaffold_938_3
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

Not on your lists

1342..2757
DNA (1416bp) protein (472aa)
L-arabinose isomerase (EC:5.3.1.4)
hypothetical protein Tax=WS1 bacterium JGI 0000059-K21 RepID=UPI0003687FAC
Tax=GWF2_Lentisphaerae_49_21_curated
anamox1_curated_scaffold_938_4
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

2797..5826
DNA (3030bp) protein (1010aa)
hypothetical protein Tax=Glaciibacter superstes RepID=UPI0003B6FCEC
Tax=BJP_IG2102_BRC1_58_13
anamox1_curated_scaffold_938_5
Planctopirus limnophila, Planctopirus, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5934..6548
DNA (615bp) protein (205aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
cyclase Tax=Thermodesulfatator atlanticus RepID=UPI0003B3F70B
imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
anamox1_curated_scaffold_938_6
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

6558..7283
DNA (726bp) protein (242aa)
hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=HIS4_SYNJB
Tax=RBG_16_RIF03_38_10_curated
anamox1_curated_scaffold_938_7
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7246..7992)
DNA (747bp) protein (249aa)
Transcriptional regulator, NifA, Fis family Tax=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) RepID=A4WRX7_RHOS5
Response regulator of zinc sigma-54-dependent two-component system {ECO:0000313|EMBL:KIG14658.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
transcriptional regulator NifA
anamox1_curated_scaffold_938_8
GWA2_OP3X_41_15_curated, OP3X, Bacteria

Not on your lists

comp(8110..8910)
DNA (801bp) protein (267aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037F7F8E
hypothetical protein
Tax=GWA2_OP3X_41_15_curated
anamox1_curated_scaffold_938_9
unknown

Not on your lists

comp(8907..9920)
DNA (1014bp) protein (338aa)

This feature has no annotations

anamox1_curated_scaffold_938_10
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10384..12141)
DNA (1758bp) protein (586aa)
Glutamine--tRNA ligase bin=GWF2_Planctomycetes_50_10 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
glutaminyl-tRNA synthetase
Tax=BJP_IG2069_Desfulfarculales_53_13
anamox1_curated_scaffold_938_11
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(12357..13013)
DNA (657bp) protein (219aa)
D-isomer specific 2-hydroxyacid dehydrogenase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Rhizobium giardinii genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
2-dehydro-3-deoxyphosphogluconate aldolase
Tax=RBG_13_Planctomycetes_63_9_curated
anamox1_curated_scaffold_938_12
CG_Omnitr_02, Omnitrophica, Bacteria

Not on your lists

comp(13086..14723)
DNA (1638bp) protein (546aa)
hypothetical protein Tax=Fervidibacteria bacterium JGI 0000001-G10 RepID=UPI00036A79B5
dehydrogenase-like protein
Tax=CG_Omnitr_02
anamox1_curated_scaffold_938_13
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(14906..16201)
DNA (1296bp) protein (432aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI000382BB07
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
anamox1_curated_scaffold_938_14
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16240..16926)
DNA (687bp) protein (229aa)
Glycosyltransferases Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D278_PELTS
WcaA; glycosyltransferases
Glycosyltransferases {ECO:0000313|EMBL:BAF59647.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
anamox1_curated_scaffold_938_15
R_Omnitrophica_44_11, Omnitrophica, Bacteria

Not on your lists

17119..17523
DNA (405bp) protein (135aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B48A5B
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Omnitrophica_44_11_curated
anamox1_curated_scaffold_938_16
unknown

Not on your lists

17526..17894
DNA (369bp) protein (123aa)

This feature has no annotations

anamox1_curated_scaffold_938_17
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

17891..18337
DNA (447bp) protein (149aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI00036A2FFC
VanZ family protein
Tax=BJP_IG2157_Anaerolineales_55_23
anamox1_curated_scaffold_938_18
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(18324..18857)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B31DE6
thioesterase superfamily protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_938_19
Salinicoccus roseus, Salinicoccus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18908..19762
DNA (855bp) protein (285aa)
ABC superfamily ATP binding cassette transporter, membrane/binding protein Tax=Sporosarcina newyorkensis 2681 RepID=F9DUH7_9BACL
Molybdenum ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIH70198.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Salinicoccus.;" source="Salinicoccus roseus.;"
ABC transporter ATP-binding protein
anamox1_curated_scaffold_938_20
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

19953..20735
DNA (783bp) protein (261aa)
UDP-3-O-acylglucosamine N-acyltransferase Tax=Methylacidiphilum fumariolicum SolV RepID=I0JX74_9BACT
lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
anamox1_curated_scaffold_938_21
unknown

Not on your lists

comp(20836..21018)
DNA (183bp) protein (61aa)

This feature has no annotations

anamox1_curated_scaffold_938_22
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(21107..24025)
DNA (2919bp) protein (973aa)
TPR repeat-containing protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LGQ9_HALO1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
anamox1_curated_scaffold_938_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

24234..26297
DNA (2064bp) protein (688aa)
Multi-sensor hybrid histidine kinase bin=GWC2_Deltaproteobacteria_42_51 species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
multi-sensor hybrid histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
anamox1_curated_scaffold_938_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26317..27054
DNA (738bp) protein (246aa)
Glycoside hydrolase family 10 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNI7_9EURY
Glycoside hydrolase family 10 {ECO:0000313|EMBL:ELZ24193.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
alpha amylase
anamox1_curated_scaffold_938_25
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27044..28549)
DNA (1506bp) protein (502aa)
Peptidase M14 carboxypeptidase A Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FNR0_DESAA
peptidase M14 carboxypeptidase A
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:ACL06341.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
anamox1_curated_scaffold_938_26
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28510..29766)
DNA (1257bp) protein (419aa)
Ribonuclease, Rne/Rng family Tax=Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) RepID=C8W5Q7_DESAS
ribonuclease, Rne/Rng family
Ribonuclease, Rne/Rng family {ECO:0000313|EMBL:ACV64057.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
anamox1_curated_scaffold_938_27
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29768..30619)
DNA (852bp) protein (284aa)
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase (EC:2.3.1.129)
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00064156}; Short=UDP-N-acetylglucosamine acyltransferase {ECO:0000256|HAMAP-Rule:MF_00387};; EC=2.3.1.129 {ECO:0000256|HAMAP-Rule:MF_00387, ECO:0000256|SAAS:SAAS00001267};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 /; VKM B-1763).;"
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BY46_DESAD
anamox1_curated_scaffold_938_28
unknown

Not on your lists

30654..30953
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying 28 items

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