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anamox1_curated_scaffold_894

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_894_1
BJP_S1_SUB10_Methanoculleus_61_9, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(104..1108)
DNA (1005bp) protein (335aa)
Modification methylase Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KB93_METBM
DNA methylase N-4/N-6 domain-containing protein
Tax=BJP_S1_SUB10_Methanoculleus_61_9
anamox1_curated_scaffold_894_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1137..4634)
DNA (3498bp) protein (1166aa)
Methionine synthase bin=GWF2_Methylomirabilis_70_14 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
methionine synthase
Tax=GWC2_Rokubacteria_70_16_curated
anamox1_curated_scaffold_894_3
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

comp(4728..6302)
DNA (1575bp) protein (525aa)
Uncharacterized protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_13_Aminicenantes_59_9_curated
anamox1_curated_scaffold_894_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(6308..7057)
DNA (750bp) protein (250aa)
Metallophosphoesterase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
bis(5'-nucleosyl)-tetraphosphatase
Tax=GWA2_Rokubacteria_73_35_curated
anamox1_curated_scaffold_894_5
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7101..8309)
DNA (1209bp) protein (403aa)
rnhB; Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII Tax=Magnetospirillum gryphiswaldense RepID=A4U028_9PROT
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
anamox1_curated_scaffold_894_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(8306..9295)
DNA (990bp) protein (330aa)
ABC transporter related protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TMM2_9CHLR
ABC transporter related protein {ECO:0000313|EMBL:EFH87022.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
putative ABC transporter ATP-binding protein
anamox1_curated_scaffold_894_7
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9288..10502)
DNA (1215bp) protein (405aa)
Efflux ABC transporter permease protein Tax=Phascolarctobacterium succinatutens CAG:287 RepID=R6X8A8_9FIRM
lipoprotein release ABC transporter permease
Efflux ABC transporter permease protein {ECO:0000313|EMBL:CDD12541.1}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
anamox1_curated_scaffold_894_8
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10522..11709)
DNA (1188bp) protein (396aa)
hypothetical protein bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
hypothetical protein
Tax=CG_Ignavi_01
anamox1_curated_scaffold_894_9
Sulfobacillus acidophilus, Sulfobacillus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11909..13126)
DNA (1218bp) protein (406aa)
Cell division protein FtsZ Tax=Sulfobacillus acidophilus RepID=F8IAV5_SULAT
ftsZ; cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU000631}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfobacillus acidophilus (strain TPY).;"
anamox1_curated_scaffold_894_10
GWA2_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

comp(13256..14482)
DNA (1227bp) protein (409aa)
Cell division protein ftsA Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8ML57_CORCM
ftsA; cell division protein FtsA
Tax=GWA2_RIF03_38_11_curated
anamox1_curated_scaffold_894_11
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14525..15424)
DNA (900bp) protein (300aa)
Cell division septal protein Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0KAY4_HALHC
cell division septal protein
Cell division septal protein {ECO:0000313|EMBL:AGB41700.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1).;"
anamox1_curated_scaffold_894_12
Moorella glycerini, Moorella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15431..16873)
DNA (1443bp) protein (481aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Moorella.;" source="Moorella glycerini.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase Tax=Moorella thermoacetica (strain ATCC 39073) RepID=MURC_MOOTA
anamox1_curated_scaffold_894_13
Desulfotomaculum acetoxidans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16870..17940)
DNA (1071bp) protein (357aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM; B-1644).;"
hypothetical protein Tax=Desulfurispora thermophila RepID=UPI0003645907
UDP-diphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
anamox1_curated_scaffold_894_14
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17937..19238)
DNA (1302bp) protein (434aa)
Stage V sporulation protein E Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DZW8_9FIRM
Stage V sporulation protein E {ECO:0000313|EMBL:CCO08724.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
hypothetical protein
anamox1_curated_scaffold_894_15
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19235..20584)
DNA (1350bp) protein (450aa)
murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase (EC:6.3.2.9)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000255|HAMAP-Rule:MF_00639}; EC=6.3.2.9 {ECO:0000255|HAMAP-Rule:MF_00639};; D-glutamic acid-adding enzyme {ECO:0000255|HAMAP-Rule:MF_00639}; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase {ECO:0000255|HAMAP-Rule:MF_00639}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 /; Z-2901).;"
UDP-N-acetylmuramoylalanine--D-glutamate ligase Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=MURD_CARHZ
anamox1_curated_scaffold_894_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20589..21719)
DNA (1131bp) protein (377aa)
phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000256|HAMAP-Rule:MF_00038}; EC=2.7.8.13 {ECO:0000256|HAMAP-Rule:MF_00038};; UDP-MurNAc-pentapeptide phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00038}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapolitanus (strain ATCC 23641 / c2) (Thiobacillus; neapolitanus).;"
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXY1_HALNC
anamox1_curated_scaffold_894_17
unknown

Not on your lists

comp(21734..21862)
DNA (129bp) protein (43aa)

This feature has no annotations

anamox1_curated_scaffold_894_18
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21885..23267)
DNA (1383bp) protein (461aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWC2_Pelobacter_58_13 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
anamox1_curated_scaffold_894_19
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23280..24755)
DNA (1476bp) protein (492aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; Meso-diaminopimelate-adding enzyme {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-L-Ala-D-Glu:meso-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-MurNAc-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|HAMAP-Rule:MF_00208}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Laceyella sacchari RepID=UPI0003B56C8A
anamox1_curated_scaffold_894_20
GWC2_Geobacteraceae_53_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24783..26699)
DNA (1917bp) protein (639aa)
Peptidoglycan glycosyltransferase Tax=Geobacter sp. (strain M18) RepID=E8WSG8_GEOS8
penicillin-binding protein
Tax=GWC2_Geobacteraceae_53_11_curated
anamox1_curated_scaffold_894_21
unknown

Not on your lists

comp(26692..26988)
DNA (297bp) protein (99aa)

This feature has no annotations

anamox1_curated_scaffold_894_22
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

comp(27103..28065)
DNA (963bp) protein (321aa)
S-adenosyl-L-methionine-dependent methyltransferase MraW bin=GWA2_OP3_53_43 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
S-adenosyl-methyltransferase MraW
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
anamox1_curated_scaffold_894_23
Mycoplasma bovis, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(28329..28853)
DNA (525bp) protein (175aa)
Cell division protein MraZ Tax=Mycoplasma bovis RepID=F7Z8K9_MYCBH
mraZ; cell division protein
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma bovis (strain ATCC 25523 / PG45).;"
anamox1_curated_scaffold_894_24
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

29636..32998
DNA (3363bp) protein (1121aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00036CED80
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Thermoactinomyces.;" source="Thermoactinomyces sp. Gus2-1.;"
chromosome segregation protein SMC
anamox1_curated_scaffold_894_trna_1
unknown

Not on your lists

33172..33258
DNA (87bp)
transferRNA Ser
anamox1_curated_scaffold_894_25
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

33376..34557
DNA (1182bp) protein (394aa)
Sulphatase-modifying factor protein Tax=Caldithrix abyssi DSM 13497 RepID=H1XSV9_9BACT
Sulphatase-modifying factor protein {ECO:0000313|EMBL:EHO40336.1}; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
anamox1_curated_scaffold_894_26
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34784..36103
DNA (1320bp) protein (440aa)
major facilitator transporter bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
major facilitator transporter
Tax=CSP1_8_Deltaproteobacteria
anamox1_curated_scaffold_894_27
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


comp(36179..37990)
DNA (1812bp) protein (604aa)
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA(Asp/Asn) ligase {ECO:0000255|HAMAP-Rule:MF_00044}; EC=6.1.1.23 {ECO:0000255|HAMAP-Rule:MF_00044};; Aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; Non-discriminating aspartyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00044}; Short=ND-AspRS {ECO:0000255|HAMAP-Rule:MF_00044};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
Aspartate--tRNA ligase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=SYD_RUBXD
anamox1_curated_scaffold_894_28

Not on your lists

38238..38627
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL51739.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox1_curated_scaffold_894_29

Not on your lists

38624..39610
DNA (987bp) protein (329aa)
hypothetical protein Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B7220E
Uncharacterized protein {ECO:0000313|EMBL:KKL51738.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
threonine dehydrogenase
Displaying items 1-30 of 35 in total

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