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anamox1_curated_scaffold_1216

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1216_1
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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comp(170..856)
DNA (687bp) protein (229aa)
Phosphatidic acid phosphatase type 2 Tax=Rhizobium sp. (strain NGR234) RepID=C3MAQ6_RHISN
phosphatidic acid phosphatase type 2
Tax=BJP_IG2102_BRC1_58_13
anamox1_curated_scaffold_1216_2
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1129..4851)
DNA (3723bp) protein (1241aa)
Putative uncharacterized protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
PAS/PAC sensor hybrid histidine kinase
Tax=RBG_16_Deltaproteobacteria_49_23_curated
anamox1_curated_scaffold_1216_3
unknown

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5011..5109
DNA (99bp) protein (33aa)

This feature has no annotations

anamox1_curated_scaffold_1216_4
RBG_13_OP3X_46_9_curated, OP3X, Bacteria

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5315..7801
DNA (2487bp) protein (829aa)
DNA gyrase subunit B bin=GWF2_Lentisphaerae_57_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
DNA gyrase subunit B
Tax=RBG_13_OP3X_46_9_curated
anamox1_curated_scaffold_1216_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7880..10408
DNA (2529bp) protein (843aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI000367E04D
DNA gyrase subunit A
anamox1_curated_scaffold_1216_6
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10410..11561
DNA (1152bp) protein (384aa)
Glycosyl transferase {ECO:0000313|EMBL:KJJ97251.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 26.;"
anamox1_curated_scaffold_1216_7

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11549..12733
DNA (1185bp) protein (395aa)
Uncharacterized protein Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZI6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN85859.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative transferase
anamox1_curated_scaffold_1216_8
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12734..13171)
DNA (438bp) protein (146aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ADU99165.1}; EC=2.7.6.3 {ECO:0000313|EMBL:ADU99165.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSE2_ALIDB
anamox1_curated_scaffold_1216_9
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(13168..14817)
DNA (1650bp) protein (550aa)
CTP synthase Tax=Leptospira vanthielii serovar Holland str. Waz Holland = ATCC 700522 RepID=N1W696_9LEPT
pyrG; CTP synthetase
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
anamox1_curated_scaffold_1216_10
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(14859..15587)
DNA (729bp) protein (243aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase Tax=Phascolarctobacterium sp. CAG:207 RepID=R6ILJ2_9FIRM
anamox1_curated_scaffold_1216_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(15685..16731)
DNA (1047bp) protein (349aa)
acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00176990}; Short=ACCase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; Short=Acetyl-CoA carboxylase carboxyltransferase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00823};; EC=6.4.1.2 {ECO:0000256|HAMAP-Rule:MF_00823, ECO:0000256|SAAS:SAAS00057486};; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Moorella group; Ammonifex.;" source="Ammonifex degensii (strain DSM 10501 / KC4).;"
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9RBG3_AMMDK
anamox1_curated_scaffold_1216_12
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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17039..17629
DNA (591bp) protein (197aa)
HNH endonuclease Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R4S9_ISOPI
HNH endonuclease
HNH endonuclease {ECO:0000313|EMBL:ADV61675.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
anamox1_curated_scaffold_1216_13
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17684..19762)
DNA (2079bp) protein (693aa)
Translation elongation factor G Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GI56_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:EEG76904.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
translation elongation factor G
anamox1_curated_scaffold_1216_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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20426..21730
DNA (1305bp) protein (435aa)
Transcription elongation protein nusA (N utilization substance protein A) (L factor) bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
NusA antitermination factor
Tax=GWA2_Rokubacteria_70_23_curated
anamox1_curated_scaffold_1216_15
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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21853..23223
DNA (1371bp) protein (457aa)
Translation initiation factor IF-2 Tax=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) RepID=IF2_DESDA
infB; translation initiation factor IF-2
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949).;"
Displaying 15 items

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