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anamox1_curated_scaffold_1977

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1977_1

Not on your lists

comp(2..445)
DNA (444bp) protein (148aa)
Marine sediment metagenome DNA, contig: S12H4_S20464 {ECO:0000313|EMBL:GAJ10831.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
anamox1_curated_scaffold_1977_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(497..2293)
DNA (1797bp) protein (599aa)
ATPase AAA Tax=Salisaeta longa RepID=UPI0003B548AE
AAA ATPase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
anamox1_curated_scaffold_1977_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2300..3124)
DNA (825bp) protein (275aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=E3FIF9_STIAD
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
anamox1_curated_scaffold_1977_4
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3147..4019)
DNA (873bp) protein (291aa)
ABC transporter related bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ABC transporter related
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
anamox1_curated_scaffold_1977_5
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(4021..5061)
DNA (1041bp) protein (347aa)
ABC-type transporter, integral membrane subunit Tax=Fischerella sp. JSC-11 RepID=G6FX83_9CYAN
binding-protein-dependent transport system inner membrane protein
Tax=RBG_16_Planctomycetes_64_10_curated
anamox1_curated_scaffold_1977_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5115..6908)
DNA (1794bp) protein (598aa)
OmpA/MotB domain protein bin=GWC2_ACD39_50_8 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_ACD39_50_8 organism_group=ACD39
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
anamox1_curated_scaffold_1977_7
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(7046..7831)
DNA (786bp) protein (262aa)
Tax=RBG_16_Planctomycetes_64_10_curated
anamox1_curated_scaffold_1977_8
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8109..11453
DNA (3345bp) protein (1115aa)
Uncharacterized protein {ECO:0000313|EMBL:KJY63995.1}; species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium asteroides.;"
anamox1_curated_scaffold_1977_9
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(11479..14088)
DNA (2610bp) protein (870aa)
Alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00036}; EC=6.1.1.7 {ECO:0000255|HAMAP-Rule:MF_00036};; Alanyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00036}; Short=AlaRS {ECO:0000255|HAMAP-Rule:MF_00036};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
Alanine--tRNA ligase Tax=Geobacter sulfurreducens RepID=SYA_GEOSL
alaS; alanyl-tRNA synthetase
anamox1_curated_scaffold_1977_10
Rhodopirellula maiorica, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(14299..14760)
DNA (462bp) protein (154aa)
DoxX (Fragment) Tax=Rhodopirellula maiorica SM1 RepID=M5RF84_9PLAN
DoxX {ECO:0000313|EMBL:EMI17756.1}; Flags: Fragment;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula maiorica SM1.;"
hypothetical protein
anamox1_curated_scaffold_1977_11
unknown

Not on your lists

15016..15561
DNA (546bp) protein (182aa)

This feature has no annotations

anamox1_curated_scaffold_1977_12
CG_ACD39_01, ACD39, Bacteria

Not on your lists

15610..16821
DNA (1212bp) protein (404aa)
Phosphofructokinase (EC:2.7.1.90)
Phosphofructokinase Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZK5_9FIRM
Tax=CG_ACD39_01
anamox1_curated_scaffold_1977_13
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16908..18251)
DNA (1344bp) protein (448aa)
hypothetical protein Tax=Kushneria aurantia RepID=UPI0003786682
serine peptidase
Tax=DS1215_Halomonas_54_146
anamox1_curated_scaffold_1977_14
unknown

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comp(18273..18992)
DNA (720bp) protein (240aa)

This feature has no annotations

anamox1_curated_scaffold_1977_15
Plesiocystis pacifica, Plesiocystis, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18997..19698)
DNA (702bp) protein (234aa)
RNA polymerase sigma factor Tax=Plesiocystis pacifica SIR-1 RepID=A6GDM6_9DELT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Nannocystaceae; Plesiocystis.;" source="Plesiocystis pacifica SIR-1.;"
ECF subfamily RNA polymerase sigma-24 subunit
anamox1_curated_scaffold_1977_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19884..20354)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CNY6_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA22791.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
anamox1_curated_scaffold_1977_trna_1
unknown

Not on your lists

19947..20019
DNA (73bp)
transferRNA Gly
Displaying 17 items

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