ggKbase home page

anamox1_curated_scaffold_2072_10

Organism: anamox1_Bacteria_55_18_curated

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(8857..9276)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator Tax=Schlesneria paludicola RepID=UPI00029B22B4 similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 127.0
  • Bit_score: 130
  • Evalue 8.70e-28
ytrA; HTH-type transcriptional repressor YtrA similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 122.0
  • Bit_score: 115
  • Evalue 8.20e-24
HTH-type transcriptional repressor YtrA {ECO:0000313|EMBL:AFV12886.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermacetogenium.;" source="Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 122.0
  • Bit_score: 115
  • Evalue 4.00e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Thermacetogenium phaeum → Thermacetogenium → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 420
ATGAAAGTCATTATCGAAACATCCAGTCGTGTGCCGGTCTACCAGCAGATTGTCACCCAAATCCGCGAGGGGATCGCACGCGGGTTGATCCAGGTGGGGGAACGGCTTCCCTCGGTCAGAGAGATGTCACGCGATCTGGTGGTCAATCCCAATACGATCGCAAAGGCTTATACCGAGCTTGAACGCCAGGGGATCCTGAACACTCGCCCCGGCCTGGGGGTCTTTGCCGCTCAGCCACGCTCGGAGCTGCTGCATGACATCCGTTCTGAACGGCTCAAGGAGGGGATCGACCGATTGCTTACCGAAGCGGTGCATCTCGGCTTCAACCGTGAAGAGGTCATCCGCCTGATCGAAGACCGTTCCCGCGCTTTCCAGTGGGATCATTCATCCACACCAGCAAAGAAGAACAGGAGGGACTAG
PROTEIN sequence
Length: 140
MKVIIETSSRVPVYQQIVTQIREGIARGLIQVGERLPSVREMSRDLVVNPNTIAKAYTELERQGILNTRPGLGVFAAQPRSELLHDIRSERLKEGIDRLLTEAVHLGFNREEVIRLIEDRSRAFQWDHSSTPAKKNRRD*