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anamox1_curated_scaffold_161_27

Organism: anamox1_Bacteria_55_18_curated

near complete RP 50 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(35042..35656)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 179.0
  • Bit_score: 114
  • Evalue 1.70e-22
2',5' RNA ligase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARL5_RUBXD similarity UNIREF
DB: UNIREF100
  • Identity: 38.5
  • Coverage: 179.0
  • Bit_score: 114
  • Evalue 1.20e-22
2',5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 38.5
  • Coverage: 179.0
  • Bit_score: 114
  • Evalue 3.50e-23

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Taxonomy

Rubrobacter xylanophilus → Rubrobacter → Rubrobacterales → Rubrobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 615
ATGGGCGATAAATCCATCCCTCACCAGCGACAGAGCCTGCTTGAGCCTTCAGGATCTCAAAAAGAGTGGCGGCTCTTTGTCGGAATCCCTCTCTGGAACAGCCTGCGGGAATCGGCCGAGGGCAAATGCCAATCCCTGAACCATGCGTACCGCTCGATCCGCTGGGTCAGGCCTGAGAACTGGCATATCACCCTGCTGTTTCTCGGCCCTGTTCAGCCCGAAAGGGTCGACCGGCTTTCAGAATGCCTCCGGGAGGCTGCCGCCTCTCATTCACAATTTGACATCGAGCTGGCTGGCCTTGGAGGTTTCCCCAGGCTTTCGAAGGCGCGAGTTGTCTGGGTAGGGGTCAAATCCGGGAAGGATCTGCTTTCACATCTGGCCGTCACAGTACGCCAGGCATGTGCTGGAATCGGATTGCCGGGAGACAAAAAACCTTTTGAAGCTCATTTGACTCTTGGGCGTGCTCGAAGCGAACCAGTGGGAATCACGGTCGAGCCTGAAATATATTCCCAGGCCTGGGGGACTCACACAGTTCGGGAAATCCACCTGATCCGAAGTTTCCTGGAAAAATCCGGCCCGCGCTATGAATCTGTGTCTGTGGGAACTCTGAAATAA
PROTEIN sequence
Length: 205
MGDKSIPHQRQSLLEPSGSQKEWRLFVGIPLWNSLRESAEGKCQSLNHAYRSIRWVRPENWHITLLFLGPVQPERVDRLSECLREAAASHSQFDIELAGLGGFPRLSKARVVWVGVKSGKDLLSHLAVTVRQACAGIGLPGDKKPFEAHLTLGRARSEPVGITVEPEIYSQAWGTHTVREIHLIRSFLEKSGPRYESVSVGTLK*