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anamox1_curated_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 84 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_161_1
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1469
DNA (1467bp) protein (489aa)
putative Asparagine synthase (Glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthetase Tax=uncultured bacterium RepID=K1YRS4_9BACT
Tax=CG_Delta_01
anamox1_curated_scaffold_161_2
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(1484..2506)
DNA (1023bp) protein (341aa)
cellulase (EC:3.2.1.4)
Cellulase {ECO:0000313|EMBL:AEB10959.1}; EC=3.2.1.4 {ECO:0000313|EMBL:AEB10959.1};; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
Cellulase Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NNB8_MARHT
anamox1_curated_scaffold_161_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(2547..3230)
DNA (684bp) protein (228aa)
id=3698629 bin=GWF2_Lentisphaerae_49_21 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox1_curated_scaffold_161_4
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(3404..4207)
DNA (804bp) protein (268aa)
hypothetical protein Tax=Paenibacillus sp. OSY-SE RepID=UPI000381DCD8
fecR family protein
Tax=RIFOXYB2_FULL_RIF07_49_35_curated
anamox1_curated_scaffold_161_5
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(4292..5206)
DNA (915bp) protein (305aa)
Aldo/keto reductase bin=GWE2_Bacteroidetes_41_25 species=Singulisphaera acidiphila genus=Singulisphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_41_25 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
anamox1_curated_scaffold_161_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5229..6944)
DNA (1716bp) protein (572aa)
putative glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780}; EC=5.3.1.9 {ECO:0000256|RuleBase:RU000612, ECO:0000256|SAAS:SAAS00115780};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glucose-6-phosphate isomerase Tax=Candidatus Nitrospira defluvii RepID=D8PA76_9BACT
anamox1_curated_scaffold_161_7
Dehalococcoides mccartyi, Dehalococcoides, Dehalococcoidales, Dehalococcoidia, Chloroflexi, Bacteria

Not on your lists

comp(7006..7458)
DNA (453bp) protein (151aa)
ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase, putative Tax=Dehalococcoides ethenogenes (strain 195) RepID=Q3Z8N0_DEHE1
Ribose-5-phosphate isomerase, putative {ECO:0000313|EMBL:AAW40058.1}; species="Bacteria; Chloroflexi; Dehalococcoidia; Dehalococcoidales; Dehalococcoidaceae; Dehalococcoides.;" source="Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195); (Dehalococcoides ethenogenes (strain 195)).;"
anamox1_curated_scaffold_161_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

7608..8300
DNA (693bp) protein (231aa)
Bacteriophytochrome (Light-regulated signal transduction histidine kinase) bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
sensor transduction histidine kinase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_161_9
unknown

Not on your lists

8418..8891
DNA (474bp) protein (158aa)

This feature has no annotations

anamox1_curated_scaffold_161_10
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

9107..10177
DNA (1071bp) protein (357aa)
oxidoreductase Tax=Armatimonadetes bacterium JGI 0000077-K19 RepID=UPI0003B5EEFF
hypothetical protein
Tax=CG_Arma_02
anamox1_curated_scaffold_161_11
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10181..11245
DNA (1065bp) protein (355aa)
Signal recognition particle receptor FtsY Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5XYE6_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus youngiae DSM 17734.;"
signal recognition particle-docking protein FtsY
anamox1_curated_scaffold_161_12
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

11259..12446
DNA (1188bp) protein (396aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0002E1FFC7
oxidoreductase domain-containing protein
Tax=RBG_13_Planctomycetes_50_24_curated
anamox1_curated_scaffold_161_13
unknown

Not on your lists

comp(12380..12577)
DNA (198bp) protein (66aa)

This feature has no annotations

anamox1_curated_scaffold_161_14
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13174..16824
DNA (3651bp) protein (1217aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI00036A7829
DNA polymerase III subunit alpha
Tax=CG_Delta_01
anamox1_curated_scaffold_161_15
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16882..17631)
DNA (750bp) protein (250aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio desulfuricans ND132.;"
Pseudouridine synthase Tax=Desulfovibrio desulfuricans ND132 RepID=F0JFA0_DESDE
pseudouridine synthase
anamox1_curated_scaffold_161_16
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17659..20121)
DNA (2463bp) protein (821aa)
DNA internalization-related competence protein ComEC/Rec2 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CGX2_DESK7
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AEG16252.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
anamox1_curated_scaffold_161_17
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

Not on your lists

comp(20118..21905)
DNA (1788bp) protein (596aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JEL4_9ARCH
hypothetical protein
Tax=BJP_IG2102_BRC1_58_13
anamox1_curated_scaffold_161_18
unknown

Not on your lists

comp(21930..22664)
DNA (735bp) protein (245aa)

This feature has no annotations

anamox1_curated_scaffold_161_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(22654..23931)
DNA (1278bp) protein (426aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000381993F
rho; transcription termination factor Rho
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
anamox1_curated_scaffold_161_20

Not on your lists

comp(23978..24610)
DNA (633bp) protein (211aa)
Dephospho-CoA kinase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D0T8_PELTS
Marine sediment metagenome DNA, contig: S01H4_L02475 {ECO:0000313|EMBL:GAG70580.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
CoaE; dephospho-CoA kinase
anamox1_curated_scaffold_161_21
RBG_19FT_COMBO_Nitrospirae_42_15_curated, Nitrospirae, Bacteria

Not on your lists

comp(24573..27272)
DNA (2700bp) protein (900aa)
DNA polymerase bin=GWD2_Nitrospirae-related_57_8 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Nitrospirae-related_57_8 organism_group=Nitrospirae organism_desc=Many Proteobacteria hits
DNA polymerase I
Tax=RBG_19FT_COMBO_Nitrospirae_42_15_curated
anamox1_curated_scaffold_161_22
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27941..28612
DNA (672bp) protein (224aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI00036AEE90
Glycosyl hydrolase {ECO:0000313|EMBL:KKA40681.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
glycosyl hydrolase
anamox1_curated_scaffold_161_23
CG_Elusi_02, Elusimicrobia, Bacteria

Not on your lists

28613..30559
DNA (1947bp) protein (649aa)
acetyl-coenzyme A synthetase (EC:6.2.1.1)
Acetyl-coenzyme A synthetase bin=GWA2_OP3_53_43 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=CG_Elusi_02
anamox1_curated_scaffold_161_24
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

30606..32066
DNA (1461bp) protein (487aa)
Cellulase., Cellulose 1,4-beta-cellobiosidase Tax=Caldicellulosiruptor obsidiansis (strain ATCC BAA-2073 / strain OB47) RepID=D9TFI3_CALOO
Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
anamox1_curated_scaffold_161_25
unknown

Not on your lists

32044..33648
DNA (1605bp) protein (535aa)

This feature has no annotations

anamox1_curated_scaffold_161_26
unknown

Not on your lists

33645..34976
DNA (1332bp) protein (444aa)

This feature has no annotations

anamox1_curated_scaffold_161_27
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35042..35656)
DNA (615bp) protein (205aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
2',5' RNA ligase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARL5_RUBXD
2',5' RNA ligase
anamox1_curated_scaffold_161_28
RIFOXYA2_FULL_Elusimicrobia_47_53_curated, Elusimicrobia, Bacteria

Not on your lists

comp(35646..36674)
DNA (1029bp) protein (343aa)
Galactose-1-phosphate uridylyltransferase bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=Leptospirillum taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
galactose-1-phosphate uridylyltransferase
Tax=RIFOXYA2_FULL_Elusimicrobia_47_53_curated
anamox1_curated_scaffold_161_29
unknown

Not on your lists

36720..37625
DNA (906bp) protein (302aa)

This feature has no annotations

anamox1_curated_scaffold_161_30
Desulfuromonas acetoxidans, Desulfuromonas, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37626..39551
DNA (1926bp) protein (642aa)
DNA mismatch repair protein MutL Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JVP7_DESAC
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Desulfuromonadaceae; Desulfuromonas.;" source="Desulfuromonas acetoxidans DSM 684.;"
hypothetical protein
Displaying items 1-30 of 84 in total

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