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anamox1_curated_scaffold_2089

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_2089_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(263..1003)
DNA (741bp) protein (247aa)
Ribonuclease PH bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ribonuclease PH
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

1126..2199
DNA (1074bp) protein (358aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA bin=GWF2_Lentisphaerae_57_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

2196..3050
DNA (855bp) protein (285aa)
NAD synthase bin=GWF2_Lentisphaerae_57_35 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
NAD synthase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_4
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

3120..4433
DNA (1314bp) protein (438aa)
DNA/RNA helicase, superfamily II Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZI4_METHD
DNA/RNA helicase, superfamily II
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
anamox1_curated_scaffold_2089_5
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4509..5354
DNA (846bp) protein (282aa)
Putative uncharacterized protein Tax=Opitutaceae bacterium TAV5 RepID=H1IPV4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF91867.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
anamox1_curated_scaffold_2089_trna_1
unknown

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5512..5585
DNA (74bp)
transferRNA Val
anamox1_curated_scaffold_2089_6
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5648..6574)
DNA (927bp) protein (309aa)
Putative uncharacterized protein Tax=Thiocapsa marina 5811 RepID=F9UB12_9GAMM
phenol degradation meta-pathway protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
anamox1_curated_scaffold_2089_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(6660..8111)
DNA (1452bp) protein (484aa)
Uncharacterized protein (Fragment) Tax=Pedosphaera parvula Ellin514 RepID=B9XPX0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58151.1}; Flags: Fragment;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
anamox1_curated_scaffold_2089_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8111..9748)
DNA (1638bp) protein (546aa)
DNA/RNA non-specific endonuclease Tax=Pedosphaera parvula Ellin514 RepID=B9XCV9_9BACT
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:EEF62305.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA/RNA non-specific endonuclease
anamox1_curated_scaffold_2089_9
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

9904..10236
DNA (333bp) protein (111aa)
Phosphotransferase system, phosphocarrier protein HPr bin=GWF2_Lentisphaerae_57_35 species=Clostridium colicanis genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Phosphotransferase system, phosphocarrier protein HPr
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_10
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

10339..11763
DNA (1425bp) protein (475aa)
RNA polymerase, sigma 54 subunit, RpoN bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
RNA polymerase subunit sigma-54
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

11786..12469
DNA (684bp) protein (228aa)
Haloacid dehalogenase domain protein hydrolase bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_12
unknown

Not on your lists

12537..13007
DNA (471bp) protein (157aa)

This feature has no annotations

anamox1_curated_scaffold_2089_13
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

13004..13558
DNA (555bp) protein (185aa)
Anti-sigma-factor antagonist bin=GWF2_Lentisphaerae_57_35 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
anti-sigma factor antagonist
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_14
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

13673..14020
DNA (348bp) protein (116aa)
Anti-sigma-factor antagonist bin=GWF2_Lentisphaerae_57_35 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
anti-anti-sigma regulatory factor
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_15
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

14036..14503
DNA (468bp) protein (156aa)
Putative anti-sigma factor bin=GWF2_Lentisphaerae_57_35 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
putative anti-sigma regulatory factor, serine/threonine protein kinase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_16
unknown

Not on your lists

14555..14803
DNA (249bp) protein (83aa)
molecular chaperone GrpE
anamox1_curated_scaffold_2089_17
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

14805..15113
DNA (309bp) protein (103aa)
Protein GrpE bin=GWF2_Lentisphaerae_57_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
GrpE protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_2089_18
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15100..15315
DNA (216bp) protein (72aa)
Chaperone protein DnaJ Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IDF6_9PORP
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral taxon 278 str. W7784.;"
chaperone protein
Displaying 19 items

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