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anamox1_curated_scaffold_4413

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_4413_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(3..362)
DNA (360bp) protein (120aa)
Transcription antitermination protein nusG bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
NusG antitermination factor
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_4413_2
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(375..578)
DNA (204bp) protein (68aa)
Protein translocase subunit secE/sec61 gamma bin=GWF2_Lentisphaerae_57_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
preprotein translocase subunit SecE
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_4413_trna_2
unknown

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comp(605..677)
DNA (73bp)
transferRNA Trp
anamox1_curated_scaffold_4413_3
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(693..881)
DNA (189bp) protein (63aa)
50S ribosomal protein L33 Tax=Sulfurihydrogenibium azorense (strain Az-Fu1 / DSM 15241 / OCM 825) RepID=C1DX90_SULAA
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
rpmG; 50S ribosomal protein L33
anamox1_curated_scaffold_4413_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(916..2124)
DNA (1209bp) protein (403aa)
Elongation factor Tu bin=GWF2_Lentisphaerae_57_35 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
putative translation elongation factor Tu
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_4413_trna_1
unknown

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comp(2245..2317)
DNA (73bp)
transferRNA Thr
anamox1_curated_scaffold_4413_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2558..3736
DNA (1179bp) protein (393aa)
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
Phosphoribosylaminoimidazole carboxylase, ATPase subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XJ16_9BACT
anamox1_curated_scaffold_4413_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3806..4291
DNA (486bp) protein (162aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase Tax=Pedosphaera parvula Ellin514 RepID=B9XJ15_9BACT
anamox1_curated_scaffold_4413_7
CG_Arma_02, Armatimonadetes, Bacteria

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4354..5328
DNA (975bp) protein (325aa)
Modification methylase BglII Tax=uncultured Desulfobacterium sp. RepID=E1YEB3_9DELT
DNA methylase N-4/N-6 domain-containing protein
Tax=CG_Arma_02
anamox1_curated_scaffold_4413_8
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

5325..5936
DNA (612bp) protein (204aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YEB4_9DELT
hypothetical protein
Tax=CG_Arma_02
anamox1_curated_scaffold_4413_9
RIFOXYD2_FULL_Elusimicrobia_34_30_curated, Elusimicrobia, Bacteria

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comp(6121..7980)
DNA (1860bp) protein (620aa)
Transmembrane and TPR repeat-containing protein 3 bin=GWF2_Bacteroidetes_33_16 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
hypothetical protein
Tax=RIFOXYD2_FULL_Elusimicrobia_34_30_curated
Displaying 11 items

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