ggKbase home page

anamox1_curated_scaffold_113

Search features with annotation key words

Displaying items 31-60 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_113_31
unknown

Not on your lists

comp(38553..39251)
DNA (699bp) protein (233aa)

This feature has no annotations

anamox1_curated_scaffold_113_32
GWA2_WOR_2_45_18_curated, WOR-2, Bacteria

Not on your lists

39395..39667
DNA (273bp) protein (91aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein bin=GWC2_OP3-like_45_7 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
4Fe-4S ferredoxin
Tax=GWA2_WOR_2_45_18_curated
anamox1_curated_scaffold_113_33
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(39659..42265)
DNA (2607bp) protein (869aa)
Response regulator bin=GWF2_Lentisphaerae_57_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
response regulator
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_34
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

42383..43069
DNA (687bp) protein (229aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase bin=GWF2_Lentisphaerae_57_35 species=Lentisphaera araneosa genus=Lentisphaera taxon_order=Lentisphaerales taxon_class=Lentisphaeria phylum=Lentisphaerae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_35
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(43127..43573)
DNA (447bp) protein (149aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI0003753567
dUTPase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_36
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

43648..44574
DNA (927bp) protein (309aa)
Thioredoxin reductase bin=GWF2_Lentisphaerae_57_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
thioredoxin reductase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_37
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

44571..46340
DNA (1770bp) protein (590aa)
ABC-type multidrug transport system, ATPase and permease component bin=GWF2_Lentisphaerae_57_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
phospholipid-lipopolysaccharide ABC transporter
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_38
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46337..46831
DNA (495bp) protein (165aa)
Secondary thiamine-phosphate synthase enzyme Tax=Opitutaceae bacterium TAV1 RepID=I6B3Y6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI19943.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
anamox1_curated_scaffold_113_39
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(47216..48922)
DNA (1707bp) protein (569aa)
ABC transporter permease Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B46DF8
CUT1 family carbohydrate ABC transporter membrane protein 2
Tax=CG_Arma_01
anamox1_curated_scaffold_113_40
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(48929..51550)
DNA (2622bp) protein (874aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZY15_MAHA5
CUT1 family carbohydrate ABC transporter membrane protein 1
Tax=CG_Arma_01
anamox1_curated_scaffold_113_41
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51763..54366)
DNA (2604bp) protein (868aa)
Alpha-xylosidase (EC:3.2.1.-)
Alpha-xylosidase {ECO:0000313|EMBL:CCA59915.1}; EC=3.2.1.- {ECO:0000313|EMBL:CCA59915.1};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
Alpha-xylosidase Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RHH1_STRVP
anamox1_curated_scaffold_113_42
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(54363..54872)
DNA (510bp) protein (170aa)
Putative Kinase inhibitor YbhB Tax=Candidatus Nitrospira defluvii RepID=D8PJC3_9BACT
putative Kinase inhibitor YbhB
Putative Kinase inhibitor YbhB {ECO:0000313|EMBL:CBK43497.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
anamox1_curated_scaffold_113_43
Parachlamydia acanthamoebae, Parachlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

55064..55696
DNA (633bp) protein (211aa)
Putative aquaporin NIP4-1 Tax=Parachlamydia acanthamoebae RepID=F8KYT8_PARAV
niP4-1; aquaporin NIP4-1
Putative aquaporin NIP4-1 {ECO:0000313|EMBL:CCB86048.1}; species="Bacteria; Chlamydiae; Chlamydiales; Parachlamydiaceae; Parachlamydia.;" source="Parachlamydia acanthamoebae (strain UV7).;"
anamox1_curated_scaffold_113_44
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(55853..56455)
DNA (603bp) protein (201aa)
30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 bin=BACIGN_2 species=Nesterenkonia sp. F genus=Nesterenkonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=BACIGN_2 organism_group=Unknown_CP
30S ribosomal protein S4
Tax=BJP_IG2069_Ignavibacteriae_38_11
anamox1_curated_scaffold_113_45
RBG_16_Bdellovibrionales_40_8_curated, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(56572..57864)
DNA (1293bp) protein (431aa)
hypothetical protein Tax=Methylophilus methylotrophus RepID=UPI0003647C75
transporter, CPA2 family
Tax=RBG_16_Bdellovibrionales_40_8_curated
anamox1_curated_scaffold_113_46
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists


57990..59927
DNA (1938bp) protein (646aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase bin=GWF2_Lentisphaerae_57_35 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_47
unknown

Not on your lists

60032..61024
DNA (993bp) protein (331aa)

This feature has no annotations

anamox1_curated_scaffold_113_48
CG_Falkow_01, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

61026..61781
DNA (756bp) protein (252aa)
Nuclease-like protein Tax=Clostridium pasteurianum BC1 RepID=R4K9R7_CLOPA
nuclease-like protein
Tax=CG_Falkow_01
anamox1_curated_scaffold_113_49
unknown

Not on your lists

61778..62023
DNA (246bp) protein (82aa)

This feature has no annotations

anamox1_curated_scaffold_113_50
unknown

Not on your lists

61999..62208
DNA (210bp) protein (70aa)

This feature has no annotations

anamox1_curated_scaffold_113_51
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

62192..65674
DNA (3483bp) protein (1161aa)
DNA internalization-related competence protein ComEC bin=GWC2_ACD39_50_8 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWC2_ACD39_50_8 organism_group=ACD39
ComEC/Rec2-like protein
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
anamox1_curated_scaffold_113_52
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

65776..66318
DNA (543bp) protein (181aa)
DJ-1 family protein bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Sulfurihydrogenibium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
DJ-1 family protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_53
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66446..66730
DNA (285bp) protein (95aa)
Transcriptional dual regulator HU-beta bin=GWB2_Proteobacteria_55_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hupB; transcriptional dual regulator HU-beta
Tax=GWB2_Deltaproteobacteria_55_19_curated
anamox1_curated_scaffold_113_54
unknown

Not on your lists

66745..66987
DNA (243bp) protein (81aa)

This feature has no annotations

anamox1_curated_scaffold_113_55
Clostridiaceae bacterium BRH_c20a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66876..68102)
DNA (1227bp) protein (409aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase Tax=Desulfotomaculum carboxydivorans (strain DSM 14880 / VKM B-2319 / CO-1-SRB) RepID=F6B4M9_DESCC
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:KJS20934.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae.;" source="Clostridiaceae bacterium BRH_c20a.;"
anamox1_curated_scaffold_113_56
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(68099..68869)
DNA (771bp) protein (257aa)
Ribosomal RNA small subunit methyltransferase I bin=GWF2_Lentisphaerae_57_35 species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
uroporphyrin-III C/tetrapyrrole methyltransferase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_57
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(68854..69474)
DNA (621bp) protein (207aa)
Response regulator receiver domain protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JGA6_9BACT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDY83134.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verrucomicrobiae bacterium DG1235.;"
LuxR family two component transcriptional regulator
anamox1_curated_scaffold_113_58
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(69521..70591)
DNA (1071bp) protein (357aa)
Putative signal transduction histidine kinase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFX5_RHOMR
putative signal transduction histidine kinase
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEN72584.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
anamox1_curated_scaffold_113_59
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

70716..71711
DNA (996bp) protein (332aa)
RND family efflux transporter MFP subunit bin=GWF2_Lentisphaerae_57_35 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
RND-type efflux transporter, membrane-fusion protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_60
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

71708..74914
DNA (3207bp) protein (1069aa)
Acriflavin resistance protein bin=GWF2_Lentisphaerae_57_35 species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
acriflavin resistance protein
Tax=GWF2_Lentisphaerae_57_35_curated
Displaying items 31-60 of 138 in total

View Taxonomy