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anamox1_curated_scaffold_113

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_113_1
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

3..332
DNA (330bp) protein (110aa)
Homoserine dehydrogenase bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
homoserine dehydrogenase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_2
R_WOR_2_68_15, WOR-2, Bacteria

Not on your lists

341..1513
DNA (1173bp) protein (391aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Proposed homoserine kinase bin=GWB2_CP_45_9 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
anamox1_curated_scaffold_113_3
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

1516..2736
DNA (1221bp) protein (407aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase bin=GWF2_Lentisphaerae_57_35 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

2786..4378
DNA (1593bp) protein (531aa)
(R)-citramalate synthase (EC:2.3.3.13)
Isopropylmalate/homocitrate/citramalate synthase bin=GWF2_Lentisphaerae_57_35 species=Methylacidiphilum infernorum genus=Methylacidiphilum taxon_order=Methylacidiphilales taxon_class=unknown phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_5
candidate division Zixibacteria, Bacteria

Not on your lists

comp(4516..5550)
DNA (1035bp) protein (345aa)
glycosyl transferase family protein Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002625B3B
Glycosyl transferase family 9 {ECO:0000313|EMBL:EQB63455.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
glycosyl transferase family protein
anamox1_curated_scaffold_113_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5699..6637)
DNA (939bp) protein (313aa)
Pirin domain protein Tax=Roseobacter sp. GAI101 RepID=B7RLY8_9RHOB
Bradyrhizobium elkanii strain UASWS1015 Contig176, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48696.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
pirin
anamox1_curated_scaffold_113_7
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6746..7213)
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Acidovorax sp. (strain JS42) RepID=A1WAJ0_ACISJ
putative protein-S-isoprenylcysteine methyltransferase-like protein
Uncharacterized protein {ECO:0000313|EMBL:ABM43265.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
anamox1_curated_scaffold_113_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

7326..8642
DNA (1317bp) protein (439aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_9
Halomonas salina, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8741..9217
DNA (477bp) protein (159aa)
hypothetical protein Tax=Halomonas smyrnensis RepID=UPI0002D563C2
Uncharacterized protein {ECO:0000313|EMBL:KGE77530.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas salina.;"
cutF; hypothetical protein
anamox1_curated_scaffold_113_10
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists


9310..11985
DNA (2676bp) protein (892aa)
Valine--tRNA ligase bin=GWF2_Lentisphaerae_57_35 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
valyl-tRNA synthetase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_11
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

11995..13020
DNA (1026bp) protein (342aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Verrucomicrobiae bacterium DG1235 genus=unknown taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hydroxymyristoyl-ACP dehydratase
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_12
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13072..14802
DNA (1731bp) protein (577aa)
DNA polymerase III Tax=Thiobacillus thioparus RepID=UPI00037E21A4
PHP domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
anamox1_curated_scaffold_113_13
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14815..15501
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Geobacter sp. (strain M18) RepID=E8WHU8_GEOS8
HAD-superfamily hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ADW14498.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
anamox1_curated_scaffold_113_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

15725..17206
DNA (1482bp) protein (494aa)
nitrate reductase bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
cytosine/purines, uracil, thiamine, allantoin transporter
Tax=RBG_16_RIF_WS3X_71_46_curated
anamox1_curated_scaffold_113_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17229..18578
DNA (1350bp) protein (450aa)
Aminotransferase class-III Tax=Pedosphaera parvula Ellin514 RepID=B9XKX6_9BACT
Aminotransferase class-III {ECO:0000313|EMBL:EEF59470.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
class III aminotransferase
anamox1_curated_scaffold_113_16
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

18631..19731
DNA (1101bp) protein (367aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Alanine dehydrogenase Tax=Chthoniobacter flavus Ellin428 RepID=B4CVH0_9BACT
alanine dehydrogenase
anamox1_curated_scaffold_113_17
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

19890..21395
DNA (1506bp) protein (502aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase bin=GWC2_Ignavibacteria_38_9 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
oxidoreductase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
anamox1_curated_scaffold_113_18
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

21424..22740
DNA (1317bp) protein (439aa)
dihydropyrimidine dehydrogenase (EC:1.3.1.1 1.3.1.2)
Dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil dehydrogenase (NAD+) / dihydroorotate oxidase B, catalytic subunit {ECO:0000313|EMBL:ABJ88559.1}; EC=1.3.1.1 {ECO:0000313|EMBL:ABJ88559.1};; EC=1.3.1.2 {ECO:0000313|EMBL:ABJ88559.1};; EC=1.3.98.1 {ECO:0000313|EMBL:ABJ88559.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Dihydropyrimidine dehydrogenase (NADP+) / dihydrouracil dehydrogenase (NAD+) / dihydroorotate oxidase B, catalytic subunit Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P61_SOLUE
anamox1_curated_scaffold_113_19
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22759..24264
DNA (1506bp) protein (502aa)
Methylmalonate-semialdehyde dehydrogenase Tax=Pedosphaera parvula Ellin514 RepID=B9XKY1_9BACT
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EEF59475.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
methylmalonate-semialdehyde dehydrogenase
anamox1_curated_scaffold_113_20
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24413..25300
DNA (888bp) protein (296aa)
ATP-dependent DNA helicase, RecQ family Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y4H1_9FIRM
ATP-binding protein {ECO:0000313|EMBL:KGP75313.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
RecQ familyATP-dependent DNA helicase
anamox1_curated_scaffold_113_21
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

25378..29256
DNA (3879bp) protein (1293aa)
ATP-dependent DNA helicase, RecQ family Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y4H1_9FIRM
RecQ familyATP-dependent DNA helicase
Tax=BJP_IG2103_Bacteroidetes_41_9
anamox1_curated_scaffold_113_22
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29270..30427
DNA (1158bp) protein (386aa)
Putative uncharacterized protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ3_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK18095.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
anamox1_curated_scaffold_113_23
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30429..31190
DNA (762bp) protein (254aa)
ABC transporter related Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LKZ4_SYNFM
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABK18096.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
anamox1_curated_scaffold_113_24
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31187..32005
DNA (819bp) protein (273aa)
Mammalian cell entry related domain protein Tax=Desulfovibrio sp. X2 RepID=S7TVJ4_9DELT
Mammalian cell entry related domain protein {ECO:0000313|EMBL:EPR41092.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. X2.;"
mammalian cell entry domain-containing protein
anamox1_curated_scaffold_113_25
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32022..32672
DNA (651bp) protein (217aa)
Putative lipoprotein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60BV1_METCA
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:AAU90523.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
anamox1_curated_scaffold_113_26
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(32734..33312)
DNA (579bp) protein (193aa)
Uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
Tax=GWF2_Lentisphaerae_57_35_curated
anamox1_curated_scaffold_113_27
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

33388..33726
DNA (339bp) protein (113aa)
id=3954772 bin=GWF2_Planctomycetes_42_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Tax=GWF2_Planctomycetes_42_9_curated
anamox1_curated_scaffold_113_28
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

33795..34142
DNA (348bp) protein (116aa)
Sigma 54 modulation protein/ribosomal protein S30EA Tax=Pedosphaera parvula Ellin514 RepID=B9XGM0_9BACT
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:EEF61071.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anamox1_curated_scaffold_113_29
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(34320..37442)
DNA (3123bp) protein (1041aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Alpha amylase catalytic region Tax=Pedosphaera parvula Ellin514 RepID=B9XPV0_9BACT
glycosidase
anamox1_curated_scaffold_113_30
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(37483..38490)
DNA (1008bp) protein (336aa)
mvaD_idi; diphosphomevalonate decarboxylase (EC:4.1.1.33)
Diphosphomevalonate decarboxylase bin=GWF2_Lentisphaerae_57_35 species=Thioalkalimicrobium cyclicum genus=Thioalkalimicrobium taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
Displaying items 1-30 of 138 in total

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