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anamox1_curated_scaffold_1946

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
anamox1_curated_scaffold_1946_1
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1..1308
DNA (1308bp) protein (436aa)
metal dependent phosphohydrolase bin=GWF2_Lentisphaerae_57_35 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
polynucleotide adenylyltransferase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
anamox1_curated_scaffold_1946_2
Rubinisphaera brasiliensis, Rubinisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1324..1725)
DNA (402bp) protein (134aa)
ATP synthase epsilon chain Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SLR9_PLABD
ATP synthase subunit epsilon
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rubinisphaera.;" source="Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 /; NBRC 103401 / IFAM 1448) (Planctomyces brasiliensis).;"
anamox1_curated_scaffold_1946_3
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(1777..4707)
DNA (2931bp) protein (977aa)
UvrABC system protein A Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IIJ1_PHYMF
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
uvrA; UvrABC system protein A
anamox1_curated_scaffold_1946_4
unknown

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4801..5634
DNA (834bp) protein (278aa)

This feature has no annotations

anamox1_curated_scaffold_1946_5
GWF2_Lentisphaerae_49_21_curated, Lentisphaerae, Bacteria

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comp(5656..6486)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00030013C9
Tax=GWF2_Lentisphaerae_49_21_curated
anamox1_curated_scaffold_1946_6
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(6591..6833)
DNA (243bp) protein (81aa)
30S ribosomal protein S18 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IFG1_PHYMF
rpsR; 30S ribosomal protein S18
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
anamox1_curated_scaffold_1946_7
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(6933..8069)
DNA (1137bp) protein (379aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
Putative GTP cyclohydrolase 1 type 2 Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IE18_PHYMF
hypothetical protein
anamox1_curated_scaffold_1946_8
unknown

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8261..8848
DNA (588bp) protein (196aa)

This feature has no annotations

anamox1_curated_scaffold_1946_9
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(8860..9810)
DNA (951bp) protein (317aa)
Xylose isomerase domain protein TIM barrel bin=GWF2_Lentisphaerae_52_8 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
xylose isomerase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox1_curated_scaffold_1946_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9900..12041
DNA (2142bp) protein (714aa)
hypothetical protein Tax=Methylobacterium sp. 88A RepID=UPI0003793D35
sensor histidine kinase
Sensor histidine kinase {ECO:0000313|EMBL:ACG77445.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
anamox1_curated_scaffold_1946_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12038..12436
DNA (399bp) protein (133aa)
Putative two-component system response regulator Tax=Lutibaculum baratangense AMV1 RepID=V4RGR9_9RHIZ
Putative two-component system response regulator {ECO:0000313|EMBL:ESR25351.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
response regulator receiver protein
anamox1_curated_scaffold_1946_12
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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12474..13268
DNA (795bp) protein (265aa)
G-D-S-L family lipolytic protein bin=GWF2_Lentisphaerae_52_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
prolyl oligopeptidase family protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
anamox1_curated_scaffold_1946_13

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comp(13293..14156)
DNA (864bp) protein (288aa)
Putative hydrolase Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IIC9_PHYMF
Uncharacterized protein {ECO:0000313|EMBL:KKN57361.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
putative hydrolase
anamox1_curated_scaffold_1946_16S_1
unknown

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15089..15681
DNA (593bp)
16S ribosomal RNA (16S rRNA)
Displaying 14 items

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